| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1158 |
|---|
| Symbol | |
|---|
| ID | 5538624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 1499938 |
|---|
| End bp | 1501149 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640893290 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001431273 |
|---|
| Protein GI | 156741144 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAGGCAT ACCTGGAAGG GTTGGCGCCG GTGTTCGATA TTCGCCTGAT CGACGTTTGG
CCCTGGTTGC CGCTGGCGCT GTTCAGCGCA TTACTGGCTT TCTGGTACAT CCAGGATGTC
ATCGCCACCC TTCGCGCGCC GCATCTCAAC CCGCATCCCG ATCTCCCTGA CACTGGTCCC
CTGGTGACGG TTATCATTCC TGCGCGCAAT GAGGCTGCGC GCATCGGCGC CTGTCTTGAA
GGTCTGGCGC GGCAGTCGTA CCGCTCCTTT GAAGTGATTG TCGTCGATGA CGATTCGAGC
GATGGCACCG CCGATGTCGT GCGCCGGTTC GCGGCGCGTC TTCCGGCGCT CACGATCCTT
TCCTCGAAAG GTTTGCCGCA CCATTGGGCG GGCAAGTGCT GGGCATGCTG GCAGGGGGCG
AATCGGGCGC GCGGCGACTG GTTCCTCTTC CTCGATGCTG ATGTTGCGCC GCAACCAGAA
TTGCTGGCAG CGCTCGTCGA GCGCGCGACC GCCGGACGCG ATATGATCAC GCTGGTGCCG
CTCATTCACC TGACCTCTTT CGCCGAACGT CTGGTGTTGC CGCCGTTCAT CGGGTTGATA
TCCATGATCT ATCCATTCGA TCGGGTGAAC GATCCATCGT CGCCGCTGGC ATTCGCCATT
GGTCAGTGCA TTATGGTGCG GCGCGATGTC TATGCTGCTG TCGATGGGCA TCGCGCGGTG
CGCGGGAGCG TGCTGGAGGA TATGGACCTG GCGCGGCTGG TAAAGCAGTC GGGCTATGCA
CTGGATGCCG CCATCGCGCC CGACCTGCTC GATGTGCGCA TGTACAATGG CTGGGAAACG
CTCACCGAAG GCTTGAAGAA AAATGCCGTC GCCGGGTATC GGAGCGGCGG CGTTCGTTCC
GGGTTGATGG GGATGCGCCT GGGGTTGATG GCGATCATGC CATGGAACAT GCTGATCGCC
GGGCAGGCGC TGCCGCTGAT CGGCGGTGAT CCTGCGCTGG CGCAGGCGCT GATGCTGGCA
GGCGCCGCGC TGCTGATTAT CAGCGCCCTC TGCTGGGGAG CGGTTGTTCG TTATCGCTTC
CGCATCTCGC CGCTCTGGGG CACTCTCTAC GGACCGGGAA CGGCGGTTTA TTTTGCGCTG
GCAGCGCAGG CGCTGTTCCA GATCCGCAGC GGCAAAGGGG TCGAGTGGAA AGGGCGCATG
TTCCCACGCT GA
|
|---|
| Protein sequence | MQAYLEGLAP VFDIRLIDVW PWLPLALFSA LLAFWYIQDV IATLRAPHLN PHPDLPDTGP
LVTVIIPARN EAARIGACLE GLARQSYRSF EVIVVDDDSS DGTADVVRRF AARLPALTIL
SSKGLPHHWA GKCWACWQGA NRARGDWFLF LDADVAPQPE LLAALVERAT AGRDMITLVP
LIHLTSFAER LVLPPFIGLI SMIYPFDRVN DPSSPLAFAI GQCIMVRRDV YAAVDGHRAV
RGSVLEDMDL ARLVKQSGYA LDAAIAPDLL DVRMYNGWET LTEGLKKNAV AGYRSGGVRS
GLMGMRLGLM AIMPWNMLIA GQALPLIGGD PALAQALMLA GAALLIISAL CWGAVVRYRF
RISPLWGTLY GPGTAVYFAL AAQALFQIRS GKGVEWKGRM FPR
|
|---|
| |