Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1154 |
Symbol | |
ID | 5538620 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1493524 |
End bp | 1494342 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893286 |
Product | pyrroline-5-carboxylate reductase |
Protein accession | YP_001431269 |
Protein GI | 156741140 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGAG ATATACGGAT TGCGATCATC GGCGCCGGGA TTATGGGCGA GGCGATGATC AGCGGCTTGC TCAAACAAAA CCTGATCCCC GCCGATCAGA TTGTCGCCAC CGAGCCACGC GCCGAACGGC GTGAAGCGAT CGAACAACGC TATGGCGTGC GCGTCACCGA CGATAACGTC GAAGCCGCTC ACTGGGCGCA GGTGACGATC TTTGCTGTCA AGCCGCAAAC TGTGCCCAGA CTTTTGCCCG AACTGCGCGG TGCGCTGCGC GATGGGGAAC TGGTCATCTC CATTGCTGCC GGCGTCCCGA TCCGCACCTA CGTCCAGGGA CTGGCGCACA GCGCCGTGGT GCGCGCGATG CCGAACACCC CGGCGCAGAT CGGCGAAGGC ATGACCGTCT GGACCGCATC GCCGGATGTG AACGAGCAGC AACGCGGCTG GGCGCGCGCC ATTCTCGGCT CTTTTGGGCG TCAGATGTTT GTTGATGATG AAACCTATCT CGATATGGCG ACCGCGATCA ACGGCACCGG TCCCGCCTAT ATCTTTATGG TGCTGGAAGC CATGATCGAT GCGGGGGTCC ACCTGGGATT GCCGCGCTAC ATGGCGGAAG AACTGGTGCT GCAAACCATG CTCGGCTCGG TGCATTATGC CATGCAGAGC CGCAGGCATC CTGCGGAACT ACGCAACGGG GTGACGTCGC CTGGCGGTAC GACGGCCGCC GCGCTCTACG AACTCGAGCG CGGCGGGTTG CGCACTGTTC TCTCCGATGC GATCTGGGCG GCATATCGGC GTTCGGCGGA ACTCGGCAAA ACCATGTAA
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Protein sequence | MLRDIRIAII GAGIMGEAMI SGLLKQNLIP ADQIVATEPR AERREAIEQR YGVRVTDDNV EAAHWAQVTI FAVKPQTVPR LLPELRGALR DGELVISIAA GVPIRTYVQG LAHSAVVRAM PNTPAQIGEG MTVWTASPDV NEQQRGWARA ILGSFGRQMF VDDETYLDMA TAINGTGPAY IFMVLEAMID AGVHLGLPRY MAEELVLQTM LGSVHYAMQS RRHPAELRNG VTSPGGTTAA ALYELERGGL RTVLSDAIWA AYRRSAELGK TM
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