Gene Rcas_1154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1154 
Symbol 
ID5538620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1493524 
End bp1494342 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content62% 
IMG OID640893286 
Productpyrroline-5-carboxylate reductase 
Protein accessionYP_001431269 
Protein GI156741140 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0345] Pyrroline-5-carboxylate reductase 
TIGRFAM ID[TIGR00112] pyrroline-5-carboxylate reductase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGAG ATATACGGAT TGCGATCATC GGCGCCGGGA TTATGGGCGA GGCGATGATC 
AGCGGCTTGC TCAAACAAAA CCTGATCCCC GCCGATCAGA TTGTCGCCAC CGAGCCACGC
GCCGAACGGC GTGAAGCGAT CGAACAACGC TATGGCGTGC GCGTCACCGA CGATAACGTC
GAAGCCGCTC ACTGGGCGCA GGTGACGATC TTTGCTGTCA AGCCGCAAAC TGTGCCCAGA
CTTTTGCCCG AACTGCGCGG TGCGCTGCGC GATGGGGAAC TGGTCATCTC CATTGCTGCC
GGCGTCCCGA TCCGCACCTA CGTCCAGGGA CTGGCGCACA GCGCCGTGGT GCGCGCGATG
CCGAACACCC CGGCGCAGAT CGGCGAAGGC ATGACCGTCT GGACCGCATC GCCGGATGTG
AACGAGCAGC AACGCGGCTG GGCGCGCGCC ATTCTCGGCT CTTTTGGGCG TCAGATGTTT
GTTGATGATG AAACCTATCT CGATATGGCG ACCGCGATCA ACGGCACCGG TCCCGCCTAT
ATCTTTATGG TGCTGGAAGC CATGATCGAT GCGGGGGTCC ACCTGGGATT GCCGCGCTAC
ATGGCGGAAG AACTGGTGCT GCAAACCATG CTCGGCTCGG TGCATTATGC CATGCAGAGC
CGCAGGCATC CTGCGGAACT ACGCAACGGG GTGACGTCGC CTGGCGGTAC GACGGCCGCC
GCGCTCTACG AACTCGAGCG CGGCGGGTTG CGCACTGTTC TCTCCGATGC GATCTGGGCG
GCATATCGGC GTTCGGCGGA ACTCGGCAAA ACCATGTAA
 
Protein sequence
MLRDIRIAII GAGIMGEAMI SGLLKQNLIP ADQIVATEPR AERREAIEQR YGVRVTDDNV 
EAAHWAQVTI FAVKPQTVPR LLPELRGALR DGELVISIAA GVPIRTYVQG LAHSAVVRAM
PNTPAQIGEG MTVWTASPDV NEQQRGWARA ILGSFGRQMF VDDETYLDMA TAINGTGPAY
IFMVLEAMID AGVHLGLPRY MAEELVLQTM LGSVHYAMQS RRHPAELRNG VTSPGGTTAA
ALYELERGGL RTVLSDAIWA AYRRSAELGK TM