Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1152 |
Symbol | |
ID | 5538618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1490744 |
End bp | 1491640 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893284 |
Product | acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
Protein accession | YP_001431267 |
Protein GI | 156741138 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
TIGRFAM ID | [TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.573328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGACT TGTTTCGGCG CGCGCCGAAG CGTTTCACGG CAGCGCGCAT CGAGAATCAG GCGATCCCCG ATAACATGTG GGTCAAGTGC CCTTCGTGCG GCGATCTGAT CTACACCAGA CAGTTCAGCG ACAATCTGAA GGTCTGTAAG TGCGGCTATC ACATGCGGCT GGCAGCGCGT GAATGGTTGG GGCTGCTCGA CGATGGTTCG TTTGTCGAGT TCGACGCCGC GCTGGCGCCG GTGGATGCGC TGGAGTTCAT ATCGCCGCGT CACGTCTACG CGCACAAGTT GAGCGAAAGC CAGGAGCAGA CCGGGCTGAA TGATGCGCTT ATCACCGGCA GCGGCGCGAT TGAGGGCATG CCATTATGCG TGGCAGTCAC CGAATTCGAG TTCATTGGCG GTTCGATGGG CGGTGCATTT GGCGAGCGCC TGGCGCGTAT CATCGAGCAG GCTGCCGACG CACGCGTTCC GCTGTTGACG ATCAACGCCA GCGGCGGTGC GCGCCAGGAA GAAGGAACCC TGGCGCTGCT CCAGATGGCG AAAGTCAATA TGGCGCTGAC CCGCCTTGCA GCGGTCGGTC AACCACACAT TGCCGTGCTG GTCGATCCGT GCTACGGCGG TGTGCTGGCG TCGTACACAT CTGTGGCAGA CATTATCATC GCTGAACCCG GCGCGCGGAT CGGGTTCGCC GGGCGTCGGG TCATTGAACA AACCATTCGG CAGAAACTGC CCGCCCATTT TCAGACCGCC GAATTTCTGT TGAGTCACGG TATGATCGAT ATGGTGACGC CGCGCGGCGA ACTGCGGAGC GTCCTGGCAA CGTTGCTCCG CTTGTTCCAC AACGCGCCCG AACGCGCCGC AGACGTTCAG AATGCCCCGG CGCTGGCGCG CGCCTGA
|
Protein sequence | MKDLFRRAPK RFTAARIENQ AIPDNMWVKC PSCGDLIYTR QFSDNLKVCK CGYHMRLAAR EWLGLLDDGS FVEFDAALAP VDALEFISPR HVYAHKLSES QEQTGLNDAL ITGSGAIEGM PLCVAVTEFE FIGGSMGGAF GERLARIIEQ AADARVPLLT INASGGARQE EGTLALLQMA KVNMALTRLA AVGQPHIAVL VDPCYGGVLA SYTSVADIII AEPGARIGFA GRRVIEQTIR QKLPAHFQTA EFLLSHGMID MVTPRGELRS VLATLLRLFH NAPERAADVQ NAPALARA
|
| |