Gene Rcas_1152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1152 
Symbol 
ID5538618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1490744 
End bp1491640 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content61% 
IMG OID640893284 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_001431267 
Protein GI156741138 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.573328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGACT TGTTTCGGCG CGCGCCGAAG CGTTTCACGG CAGCGCGCAT CGAGAATCAG 
GCGATCCCCG ATAACATGTG GGTCAAGTGC CCTTCGTGCG GCGATCTGAT CTACACCAGA
CAGTTCAGCG ACAATCTGAA GGTCTGTAAG TGCGGCTATC ACATGCGGCT GGCAGCGCGT
GAATGGTTGG GGCTGCTCGA CGATGGTTCG TTTGTCGAGT TCGACGCCGC GCTGGCGCCG
GTGGATGCGC TGGAGTTCAT ATCGCCGCGT CACGTCTACG CGCACAAGTT GAGCGAAAGC
CAGGAGCAGA CCGGGCTGAA TGATGCGCTT ATCACCGGCA GCGGCGCGAT TGAGGGCATG
CCATTATGCG TGGCAGTCAC CGAATTCGAG TTCATTGGCG GTTCGATGGG CGGTGCATTT
GGCGAGCGCC TGGCGCGTAT CATCGAGCAG GCTGCCGACG CACGCGTTCC GCTGTTGACG
ATCAACGCCA GCGGCGGTGC GCGCCAGGAA GAAGGAACCC TGGCGCTGCT CCAGATGGCG
AAAGTCAATA TGGCGCTGAC CCGCCTTGCA GCGGTCGGTC AACCACACAT TGCCGTGCTG
GTCGATCCGT GCTACGGCGG TGTGCTGGCG TCGTACACAT CTGTGGCAGA CATTATCATC
GCTGAACCCG GCGCGCGGAT CGGGTTCGCC GGGCGTCGGG TCATTGAACA AACCATTCGG
CAGAAACTGC CCGCCCATTT TCAGACCGCC GAATTTCTGT TGAGTCACGG TATGATCGAT
ATGGTGACGC CGCGCGGCGA ACTGCGGAGC GTCCTGGCAA CGTTGCTCCG CTTGTTCCAC
AACGCGCCCG AACGCGCCGC AGACGTTCAG AATGCCCCGG CGCTGGCGCG CGCCTGA
 
Protein sequence
MKDLFRRAPK RFTAARIENQ AIPDNMWVKC PSCGDLIYTR QFSDNLKVCK CGYHMRLAAR 
EWLGLLDDGS FVEFDAALAP VDALEFISPR HVYAHKLSES QEQTGLNDAL ITGSGAIEGM
PLCVAVTEFE FIGGSMGGAF GERLARIIEQ AADARVPLLT INASGGARQE EGTLALLQMA
KVNMALTRLA AVGQPHIAVL VDPCYGGVLA SYTSVADIII AEPGARIGFA GRRVIEQTIR
QKLPAHFQTA EFLLSHGMID MVTPRGELRS VLATLLRLFH NAPERAADVQ NAPALARA