| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1150 |
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| Symbol | |
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| ID | 5538616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1487835 |
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| End bp | 1489880 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893282 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001431265 |
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| Protein GI | 156741136 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.620757 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTT TCACGCGCGT TCTGAGCCGT CGTACAGTGT CAGCAGTTCC GGTCATCCTC
TTTCTTCTGG CAATTATTGT GCGCTTACCC AACGGCATCT TTCTCACGGT CGATGAAGCC
TACCACTGGA TCGCGCTCTC GAAACGTTTC GCCACCACGC TCTCTACCGG CAATTTTGCC
GATACCTTCT ACTTCGGGCA TCCGGCTGTT ACGACTCTCT GGCTTGGCGT GGCGGGCCAT
TGGCTCTACG ATACCCTGAC TGTGCCCGAA ATCATTGGTG AGGGCAAGGA TACCTTCTAT
CCCCTGGTGC GCCTGCCGGC AGCGTTGGTC ACGGCGCTTG CGCTTGCACT TTCGTATCCG
CTGCTCAAAC GCTTATTTGG CTTCCATGTT GCGCTCCTTG CGGCGCTTCT CTGGGTGGGT
GAGCCGTTTC TGGTCGCTCA CTCGCAGTTG TTTCACATGG ACGCCACGCT CACCTCGTTG
ATGACGCTGA GTCTGCTTTT ACTGTTGATT GCTCTCCAGC ATCGCGAGGG CAGTCTGCTC
GGTTCGCCCT GGTGGATCGG CAGCGGTGTG GCGTTCGGTC TGGGGCTGCT CACAAAGTCG
CCTGCGCTCT TGCTCATACC GATGGCGGGG CTGATTGCAC TGTTTCGGCA GTGGGACGCC
ATCCGCGATA TTCGCTCATT TGTGAAAGCG CTCATCGGTT GCGTTGCGCC GCTGTGCGTG
TGGGGCGGGA TTGCGGCAAT TGTCTGGACG GTGCTCTGGC CCGCGATGTG GGTCAAACCG
CTGGCTACAA CGTGGGGTGT GGTGTCGGAG ATCCTCTTCG ATGGCGGCGC GCCGCACCCC
TGGGGCAATT TCTTTATGGG ACGCGCTGTT GACGATCCAG GACCGCTCTT CTATCTTGTG
GCGATCCCTT TCCGACTGGC GCCCTGGACG TTGATCGGCG TTCTGTTGTG GGTCGGATTC
ACCGTGACGG ATGGCAGGCG CGCATGGAGT GGATCGAACC GCTGGTTGCT ACTGCTGGCG
CTCTTCGTTG TCCTTTTTGT TGCGGCGATC TCGGTGATGG CAAAAAAATT CGACCGCTAT
GCGCTACCGG TCTTTCCTGC GCTGACAATC CTGGCGGCAG CCGGGATCTG CCGCAGCGCC
GGTTTCTTGT GGCGCGGTAT CACAAGGTTT GTCGTCGTTC CGCCGCAGCG GTTCATCGTT
GCGGGGTATG CGTGTGCCAT CATCACGCTG GCGATTAACC TGTACGCCTA TTTCCCGTAC
TATCTGGCAT ATTACAGCCC GCTGCTGGGA GGAGGAGCGG CGGCAGAGCA GATTCTGCCC
GTTGGTTGGG GGGAAGGGCT TGAACTGGCT GCGGCATTTA TCGCCGCACA ACCCGACGGC
AAGGATCGTC CGATTGCCGT GTTCTATCAA CCGGTGCTAC GCCCATTTGC GCCGGCGGGT
GTCGCACCGC TCCAGGCGAT CCAGGACCCG CGTCGGGTCG ATTATGCGAT TGCGTACATC
GATCAGTTGC AACGCAACAC CCAACCCGAA CTTCACCAAC CATTTCGCCG TCTGCAACCG
TTGTACACCG TGCGCATCCA TGGTATCAAC TACGCCTACG TCTACCAGGT TCCGCCGCCG
GTCGCGCAGC CACTCAAGGC CGATTTCGGC GAAGCCATTC ATCTGCGCGG CTACGATCTG
GATGCTTCGG CGATCCGATC CGGCGGCGCG CTGACCATTA CTCTGGAGTG GCAGGCGCGC
GCGCCGGTGG ACAATGACTA TGTTCTCTTT ATTCACGTGT TGAATGATCG TGCTGAGAGG
GTAGCACAGA TCGACGTGCC GCTCGGAACG GATCACTGGA CCTCGCGGAC ATGGCGAGCG
GGACGATGCT TTTCAACCCT GTATCGTGTT CCGCTTCCGT TCGATCTGCC GGCCGGGACG
TATCGCCTGG CGATGGGTGT GTACGACCCG CACACCTTTG CCAGATTGTC GCTGCGCACG
GACGGGGAAC GCGCTACGGA TGCCGGCGAA CACGCGCTGC TCTTGACGCG CATCACGATC
CCTTGA
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| Protein sequence | MAAFTRVLSR RTVSAVPVIL FLLAIIVRLP NGIFLTVDEA YHWIALSKRF ATTLSTGNFA
DTFYFGHPAV TTLWLGVAGH WLYDTLTVPE IIGEGKDTFY PLVRLPAALV TALALALSYP
LLKRLFGFHV ALLAALLWVG EPFLVAHSQL FHMDATLTSL MTLSLLLLLI ALQHREGSLL
GSPWWIGSGV AFGLGLLTKS PALLLIPMAG LIALFRQWDA IRDIRSFVKA LIGCVAPLCV
WGGIAAIVWT VLWPAMWVKP LATTWGVVSE ILFDGGAPHP WGNFFMGRAV DDPGPLFYLV
AIPFRLAPWT LIGVLLWVGF TVTDGRRAWS GSNRWLLLLA LFVVLFVAAI SVMAKKFDRY
ALPVFPALTI LAAAGICRSA GFLWRGITRF VVVPPQRFIV AGYACAIITL AINLYAYFPY
YLAYYSPLLG GGAAAEQILP VGWGEGLELA AAFIAAQPDG KDRPIAVFYQ PVLRPFAPAG
VAPLQAIQDP RRVDYAIAYI DQLQRNTQPE LHQPFRRLQP LYTVRIHGIN YAYVYQVPPP
VAQPLKADFG EAIHLRGYDL DASAIRSGGA LTITLEWQAR APVDNDYVLF IHVLNDRAER
VAQIDVPLGT DHWTSRTWRA GRCFSTLYRV PLPFDLPAGT YRLAMGVYDP HTFARLSLRT
DGERATDAGE HALLLTRITI P
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