| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1148 |
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| Symbol | |
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| ID | 5538614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1485289 |
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| End bp | 1486959 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893280 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431263 |
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| Protein GI | 156741134 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG5421] Transposase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.591181 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTACG CCCATGAACA GACCGAAACG TGGAACACGA CCGCCGAGCA GATTGATGAT
ATTCCGATTC TTATTGCGCA TATGCGCAGA ATGGGCTTGC CTCAGGCGCT TGATCGTCAC
ATTCCCACAC GCGCCTACTG GGGCAACCTC AGCGTTGGTT GGACTGCGGC GGTCTGGTTG
ACGCATCTGC TGTCGTGCAG CGATCACAAA CCCGCCCATG TGCAGCAGTG GGTGGAGACC
CATATCGCGG CGCTGCGCTG GTGCATCGGC AGCGAGATAA CGCATGCCGA CGTGGGCATT
GATCGGCTCC ACGATGTGCT GATCGGACTC AGCCAGGACG ACCAATGGCA GGCAATCGAG
ACCGATCTGA ACCGTCGTAT GCTCCGCGCC TGGCCATGGA CCTCTCGCCA GGTGAATCTG
CGCCTGTACG AAGGGCGTTC GTGGTTTGTT GCGCCGAGCG GCGCCTTTCA GATCGCCAGA
GTGCATCCCT GGCGCGCCAG AACGTTGCGC CAGTCAATTG TACTGGCAAC GATCCGTGCG
TCGAATCTGC CGTTCGTAAC GTGGTCGTTC CCCGAGGATC ATGTTCCACC TGTATTGTTC
GCCAGGATAC TGGAACGGAT CTCACAGGAC CTGCCCTCAC AACGGCTTCG ATTTATTGGT
GACTCGCTGT TCGCTCCAGG ACTCCGGGGT GCGGTTCATA TGCGCAACGA TGAGTACCTC
TGCCCGCTCC CCGATACGCA TCCCGATTCT CTCAATCCGC TCACAGCCCA TTTTGCTGCG
CATACGCCCG CATGCGCGGC GGGGCGAAAT GGCAATCCTC ACCATCTCAC TGCTGACGAC
AGTATCGAAT GGTACGCGCC GGTCAGTGTC GAGATCGATG GCGCGACCGT GGCGTGGAAC
GAGCGACGCA TTGCTGTGCG TTCACCGGTG CAGGCGCATC GGCTGGAAGA AGCGCTCCGC
ACCCGGTTAG TGCGCGCAGA GGCGGCATTG CTTGCGCTCG TCGAGCGTAA GCGTGGGAAA
CGTCGTCCGC GTTCCCTTGA AGCGTTGCGC GAAGCTGCCC ACGCCATCCT CGACAGTTAT
CAAGTTCATG GGTTGCTGCG CCTGGATTTT GCCGAGCAGG TCCAGGAGCG ACTTGTCCGC
CGGTACCGCG GACGCCCAAC GGGCATGCGC GTCGAGCGTG ATGTGGGCCT GAACGTTTCG
ACCGATGCCG ACGCGCTTGC GCAGGCGATC CGACGCCTGG GCTGGCAAAC CTTTGTGTCC
AACATTGCTC CGCACGACCT GTCCGCCGAC CGTATCCTTG CCATCGCCGC TCCGGTCTCT
GGATTCGAGC GTTTGAACGG TCGTCCGCTC TCGTTGGCGC CACATGAAGT GCATACTCCC
GAACTGGAGA CCGGACTGGT GCGTCTGCTC GCTCTGGGGC TGCGCACTCT CGCACTGCTG
GAAACGATTG CGCGCGACCA ATTGATCAAG GAAGAGGTGC TGTCCGCTTC GGACAGCGAA
CGTGCGGCAT CGCGCACCAC CGGCGAGCGA TTGCTCGACG CCTTCCAGGA TATTATGCTC
ACACCCGGCA TCAATCAGCG TCTAGGCGCG ATCACGCCGC TTTCACCGTT GCAACAGCGG
GTGCTGCATC TGGTGGCGTT GTCGCCGGAT ATCTACCGGA TGCCCGGGTA A
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| Protein sequence | MPYAHEQTET WNTTAEQIDD IPILIAHMRR MGLPQALDRH IPTRAYWGNL SVGWTAAVWL
THLLSCSDHK PAHVQQWVET HIAALRWCIG SEITHADVGI DRLHDVLIGL SQDDQWQAIE
TDLNRRMLRA WPWTSRQVNL RLYEGRSWFV APSGAFQIAR VHPWRARTLR QSIVLATIRA
SNLPFVTWSF PEDHVPPVLF ARILERISQD LPSQRLRFIG DSLFAPGLRG AVHMRNDEYL
CPLPDTHPDS LNPLTAHFAA HTPACAAGRN GNPHHLTADD SIEWYAPVSV EIDGATVAWN
ERRIAVRSPV QAHRLEEALR TRLVRAEAAL LALVERKRGK RRPRSLEALR EAAHAILDSY
QVHGLLRLDF AEQVQERLVR RYRGRPTGMR VERDVGLNVS TDADALAQAI RRLGWQTFVS
NIAPHDLSAD RILAIAAPVS GFERLNGRPL SLAPHEVHTP ELETGLVRLL ALGLRTLALL
ETIARDQLIK EEVLSASDSE RAASRTTGER LLDAFQDIML TPGINQRLGA ITPLSPLQQR
VLHLVALSPD IYRMPG
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