Gene Rcas_1146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1146 
Symbol 
ID5538612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1482499 
End bp1483701 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content61% 
IMG OID640893278 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001431261 
Protein GI156741132 
COG category[R] General function prediction only 
COG ID[COG4552] Predicted acetyltransferase involved in intracellular survival and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAC GCGGTGACAT TATCATCCGT TCCGCCGAGA CGCCTGCCGA ACTCCATGCG 
TTCTTCCGGC TCGCAGCGGA GACATTCGCT CTCAACGCGC TCCATAGCGC CACGCGCTGG
CAACAGCACG TCGAGTGCGC ACCGGACTAT GTTCCCGGAC AGGTGCGTTG CGCCTTTGTC
GCAACCACGC TGGTCGGCGG CTATATTCTG TATGAACGCA GCATGCGGGT CGGCTTCGTG
ACTATTCCAA CCGGATGCTT CGCCAGTCTC GTCACCCATC CAGACTGGCG CGGTTGCGGG
GTTGCCACGG CGCTGATGCA CGATGCTCTG GCACGCGCAA TCGAACGGCG TTTGGGGTTG
ATTCTGCTCG ATGGCATCGC TGGCTTCTAT GGCCGCTTCG GATACGTGGA CGTTCTCGAT
ACCACGCGCC ATATCATTAA CCGGGCGCAC CTTGCTGCGA TGCCCAGGAG TCCATACACG
GTGCGTCCGG CGACACTGGA TGATGCGCCG GTATTGCGCG ACCTGTATGA ACAGCACTAT
GCTGGCTACT GTGGCAGTTT TGTGCGCACT ATCGCGCGGC AGCGCCACGA TCTGGCGTTG
CGACTGGAGG AGAATCCGCA ATGCCTGGCA TACGATGATG ACGGGCAGGC ATGCGGGTAT
CTGATCCTGC CGTCGCGAGC GCCGGGCAAC CGTGCGATTG AAGCCGCCGC CGATAACTGG
CACGCCGCAC TGGCGCTGCT CCAGTACCAC GCCAGCATTG CCAGGGAAGC GGCAGAGATC
GACTGGTCTC TGCCGCCTGA CTCGCCGACA TTCTATGCCC TTGCCGATCA TCTGAACCTG
ACGAGCCGTT CCGTTCACCA TCCCGATGAG GGATGGATGG CGCGCTCTGC ACACCTGCTA
ACGTTGCTCG ACTGCATCAG GCCACTGCTC GATGCGCGAC GCCGGTCATC TGGCGGCGCA
GCGTTCCAAT TACAGATCAG AGACGCCGAT GTATCGTTGA TTGTGGGAGA AGAAGCCAAT
GCGCCGGACC TGCCAACAGT CGCGCTGACA CCGCAAGCGC TCGTGCAACT ACTGTTCGGC
TTTCGTCCGG CGCACTGGAT TGCTCGTTCC CCTGGCATGC GCATTGCGCC GACGATTCTG
CCGACACTCG ACGCAATCTT TCCGACAGGT CACGCCTGGA TTGCCGGGTC TGACGCATTT
TGA
 
Protein sequence
MPKRGDIIIR SAETPAELHA FFRLAAETFA LNALHSATRW QQHVECAPDY VPGQVRCAFV 
ATTLVGGYIL YERSMRVGFV TIPTGCFASL VTHPDWRGCG VATALMHDAL ARAIERRLGL
ILLDGIAGFY GRFGYVDVLD TTRHIINRAH LAAMPRSPYT VRPATLDDAP VLRDLYEQHY
AGYCGSFVRT IARQRHDLAL RLEENPQCLA YDDDGQACGY LILPSRAPGN RAIEAAADNW
HAALALLQYH ASIAREAAEI DWSLPPDSPT FYALADHLNL TSRSVHHPDE GWMARSAHLL
TLLDCIRPLL DARRRSSGGA AFQLQIRDAD VSLIVGEEAN APDLPTVALT PQALVQLLFG
FRPAHWIARS PGMRIAPTIL PTLDAIFPTG HAWIAGSDAF