| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1138 |
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| Symbol | |
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| ID | 5538604 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1474080 |
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| End bp | 1475144 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893271 |
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| Product | ribosomal small subunit Rsm22 |
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| Protein accession | YP_001431254 |
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| Protein GI | 156741125 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG5459] Predicted rRNA methylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.169783 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCGT GTTCGCACGC ATCTATTCCA GAGGTCTCCC GACTCTTTAT GATCGAACGT
CTGCCGCCTG ATCCGCGCAT GATTGCGCTC CCTGCCGAGT TGCGTAACGC TATCGCGCAG
GCGCTCGACC GTGTTCCCGC AATCCGCTGG ATGACCGCAG CGCGCACGTT GAGCGAGCAG
TACCGCGCCC TCGATGACAT TGGCGCAGCG CCGGCAGTGC GCACGCATCT CGATGCCCTT
GGCTATGCTG CGCTCTTCAT GCCGGCCACG TATGCGCAAC TATACGGTGC GATGAAAGCG
GCTGCCGAGC GCATCCCATC GTGGTCGCCG GAAACCATGC TCGATATGGG GAGCGGACCC
GGAACGGCGC TCTGGGCAGC AACGGTGTGC TGGCCGTCGC TCCGCGACCT GACCGCCTGG
GAGCGCGAGC CGGTGTTGAT TGCGCTGGGG CGCAATTTTG CGCATACGAG CGCAAATCCG
GCGCTGCGGA GCGTGCGTTG GGTGCAACGC ACCCTGCAAG CCCCTATCGA ACGCGGCATC
CGGTTCGATC TGGTTGTGCT CGGTCACGTG CTTGGCGAAA TACCACCGGA TGAGCGCAGT
GCGATTGTGG AAACCGCCTG GCGCCTGAGT CGTGGCATGC TCCTGATCGT CGAACCTGGC
ACTTCGGTTG GGTTTGCCGT GGTGCGCGCC GCGCGCGACC TGTTGCTCGC CAACGGCGCC
GCCACGATTG CACCCTGCAC CCACGATCAG CCCTGCCCGC TCACCAACGA CTGGTGCCAC
TTTCCGCAAC GACTGCGCCG TCCTGAGTTT CAGCGGCGCG CGCGCGGCGC GTCGTCGCCG
TGGGAAGACG CCAAGTACAG TTATGCTGCG CTCACCCGCT TTCCGCCCGA ACGACCGGTC
TGGGGCAGGG TCATTCGCGA ACCGACGTTC AACAAGGCGT ATGCCGAAGT CCTGATCTCA
TCGCGCGACG GTATTCTGCG GCATCGCGCG CTCAAACGCG ATCGCGACGC CTTCAAATGG
GTCAAGCATC TTGAATGGGG ACAGACACTC GAGGAGCAAC CATGA
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| Protein sequence | MKACSHASIP EVSRLFMIER LPPDPRMIAL PAELRNAIAQ ALDRVPAIRW MTAARTLSEQ
YRALDDIGAA PAVRTHLDAL GYAALFMPAT YAQLYGAMKA AAERIPSWSP ETMLDMGSGP
GTALWAATVC WPSLRDLTAW EREPVLIALG RNFAHTSANP ALRSVRWVQR TLQAPIERGI
RFDLVVLGHV LGEIPPDERS AIVETAWRLS RGMLLIVEPG TSVGFAVVRA ARDLLLANGA
ATIAPCTHDQ PCPLTNDWCH FPQRLRRPEF QRRARGASSP WEDAKYSYAA LTRFPPERPV
WGRVIREPTF NKAYAEVLIS SRDGILRHRA LKRDRDAFKW VKHLEWGQTL EEQP
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