Gene Rcas_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1135 
Symbol 
ID5538601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1470415 
End bp1471932 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content62% 
IMG OID640893269 
ProductMg chelatase, subunit ChlI 
Protein accessionYP_001431252 
Protein GI156741123 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00125802 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAA AAGTTTATAG CAGCGCCGTG ATTGGTCTCG AAGGCGTTTT GGTCGAGGTC 
GAAGTCGATA TTGCGCAAGG ATTGCCGAGT TTCACCATCG TCGGGCTAGG GGACACCGCC
GTGCAGGAAA GCCGGGAGCG GGTGCGTGCT GCCGTCCGCA ACTGCGGCGC CTCGTTCCCG
ATGAAGCGGA TCACGGTCAA CCTGGCGCCG GCCGATCTGC GGAAGGCTGG TCCCGCCTAC
GATCTGCCGA TCGCCATTGG ATTGTTGCTG GCGTCGGAAC AGGTGCGGGG GGATGTCCAC
GATGCAGTGT TTATCGGCGA GTTGGGTCTC GACGGTGCTG TGCGCCACAT CGACGGCGTG
CTGCCGATGG TCGCCGTCGC GCGCGAACAG GGCATCCGGC GCGTCTTTGT GCCCCAGGAA
GATGCTGCGG AGGCGGCGCT GGTCAGTGGA ATCAGCATTA TCCCGGTGCA GCGCCTCGAC
GATCTGACGG CGCACCTGAG CGGTGTGAAG GCGTTGCCGG AGTATCTGAG CCGACCAATC
GACACTGCGC CGCCACCGGT ATATCCGGTA GACTTCAGCG TGGTGCGCGG GCAGGAACAT
GTCAAGCGCG CGCTGGAAAT CGCAGCCGCT GGTGGGCACC ACGTGCTGAT GACCGGCAGC
CCTGGCTCTG GAAAAACGCT CATGGCGCGC GCGCTGATCT CGATCCTGCC GCCACTGACC
ACGAGTGAGG CGATTGAGGT GACGAAAATC TACAGCGTCG CCGGGCAATT GCCGAAGGAT
ACGCCTCTGA TCCGCCAGCG ACCCTTCTGT GCGCCGCACC ACACAACCTC ACTGGCGGGG
CTGGTCGGCG GCGGCGGGGT GCGGGTCAAA CCCGGCATGA TTTCACTGGC GCACCGTGGC
ATCTTGTTTC TCGACGAACT GCCGGAGTTC GGCAGCAAAC TCGATGTGCT GCGCCAACCG
CTTGAAGATC GGGTGGTTAC GTTGAGTCGT GCTGTCGGGA GTATCACTTA CCCTGCATCA
TTTATGCTGA TCGCGGCACA GAACCCCTGC GTATGCGGTT GGTACGGCGA CCCGGAGCGC
CAGTGTACCT GCACGGCAGC GGCAGTCGCG CGGTATCAGC GGCGGGTCAG CGGACCGGTG
CTCGACCGGT TCGATATGTT TGTCTATGCC CCGCGCGTCC CTTTTGACAA ATTGAATACC
CTGCGCTCTG GCGAGGAGTC GGCTATCATC CGCGAACGGG TGATTGCGGC ACGACAGATC
CAGGAACGTC GCTTCCGGGG AACCCATCTG CTCACCAACA GCGATATGGG ACCGGCGGAA
ATCCATCAGC ACTGCCGGCT CAACAGCCAG AGTCAACTCA TTATGCAGAA CGCCATGCGC
CAGCACGATC TCTCGGCGCG CGGGTATCAC CGCATTCTGA AACTGGCGCG CACCATTGCC
GATCTCGCCG GGTCTGCGCA CATTACTGCA CAGCACCTGG GAGAGGCGTT GCAGTACCGA
TTGCGGCAGG CAGAGTAA
 
Protein sequence
MLAKVYSSAV IGLEGVLVEV EVDIAQGLPS FTIVGLGDTA VQESRERVRA AVRNCGASFP 
MKRITVNLAP ADLRKAGPAY DLPIAIGLLL ASEQVRGDVH DAVFIGELGL DGAVRHIDGV
LPMVAVAREQ GIRRVFVPQE DAAEAALVSG ISIIPVQRLD DLTAHLSGVK ALPEYLSRPI
DTAPPPVYPV DFSVVRGQEH VKRALEIAAA GGHHVLMTGS PGSGKTLMAR ALISILPPLT
TSEAIEVTKI YSVAGQLPKD TPLIRQRPFC APHHTTSLAG LVGGGGVRVK PGMISLAHRG
ILFLDELPEF GSKLDVLRQP LEDRVVTLSR AVGSITYPAS FMLIAAQNPC VCGWYGDPER
QCTCTAAAVA RYQRRVSGPV LDRFDMFVYA PRVPFDKLNT LRSGEESAII RERVIAARQI
QERRFRGTHL LTNSDMGPAE IHQHCRLNSQ SQLIMQNAMR QHDLSARGYH RILKLARTIA
DLAGSAHITA QHLGEALQYR LRQAE