Gene Rcas_1133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1133 
Symbol 
ID5538599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1468116 
End bp1468430 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content61% 
IMG OID640893267 
Producthypothetical protein 
Protein accessionYP_001431250 
Protein GI156741121 
COG category[K] Transcription 
COG ID[COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000628403 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.789236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAAA AAAAGCAGAA GGGACCGCGC CCAAAGCATG TGCCGCAGCG CACATGTGTG 
GTGTGTCGTT GCACCCATGC GAAACGCGCG CTGATTCGCC TGGTGCGCGA TGCCGATGGT
CGGGTGCATG TCGATCCAAC CGGGAAGCGC AATGGGCGTG GCGCTTATCT GTGTCACAAC
TCTGAGTGCT GGAATCAGGC GATCCGGCGC GGTGCGCTGG CGCGCGCGCT GCGGATCGAC
GCGTTGCATC CGGATGATAG TGCGGCGCTT GAAGCATATG CGCGAGCGTT GACGCCGTTG
ACGATTGCAG AATAG
 
Protein sequence
MPKKKQKGPR PKHVPQRTCV VCRCTHAKRA LIRLVRDADG RVHVDPTGKR NGRGAYLCHN 
SECWNQAIRR GALARALRID ALHPDDSAAL EAYARALTPL TIAE