| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1126 |
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| Symbol | |
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| ID | 5538592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1459861 |
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| End bp | 1461105 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893260 |
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| Product | hypothetical protein |
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| Protein accession | YP_001431243 |
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| Protein GI | 156741114 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTG TTGAAACCAT CCGCATTGCC CTGAGCAGCC TGTCTGCCAA TAAATTGCGC
TCGGCGCTGA CGATGCTCGG CATTATTATC GGTGTCGGCG CGGTAATCAC GCTCCTCGCG
CTCGGCGGCG CCATTCAGAC GCTGGTCACA CGCGAGTTGC AGGGGTTGGG ATCGAACCTG
GTCTTTGTGT TTCCCGGCAC CAATGATCCT GAACAGAACC GGCGCGTGCC GCCGCGACTG
ACGAACGAAG ATGTCGCCGC CCTTGCCGAT CCGCTCAATG TTCCGGCTGC CGCAGCCGTG
ACGCCGCAGT TGACCCGGGG GGCGCTGATC GTCTACGCTG GCGCCGGTTT CGATGGGCGC
GTCGCTGGGG TGACACCGAA TTATCCGCAG GTGCGCAATG CCCGGGTGGT CAGCGGGCGC
TTCTTTGATC AGACGGAACT CGATCTGCGC TCGCGCGTTG CGGTTATTGG CGCCGATGTG
CGCGCGTCGC TCTTTCCCGA TGAAGACCCG ATCGGGAAGC GCATCCGCAT CAATGATGTC
AGTTTCGAGG TCATCGGCGA AATGGCGCCG CGCGGCGGCA ACTTCGGTCC CAGTGAAGAT
AATCTGGTGT TCGTGCCCAT CACGACGGCG CAGACGCGCC TGTTTCCGCC ACCGCCCGGC
GCAGTAAGCC GAATCGACGT CAGCGTGGTC TATATCCAGG CGGTCGATGA GCGCCGCATT
GATGACGTGA TCGATCAGGT AACGGAGGTG CTGCGCCGTC GTAACGGGTT GACCTTTCAG
GACAACAATT TTACGATTGT GACGCAACAA GACCTGATCG CGTCGTTCGG CACAATTACC
GGCGCGCTGA CGGCATTTCT TGGCGCAATT GCGGCAATCT CGTTACTGGT CGGCGGGATT
GGCATTATGA ACATCATGCT CGTTTCGGTG ACCGAGCGCA CCCGCGAAAT CGGGCTGCGC
AAAGCGGTCG GCGCGCGGCG GCGCGACATC CGCTTTCAGT TTGTCATCGA GGCGACCATG
CTGAGTCTCC TTGGCGGATT GCTCGGTATT GCGCTCGGCT ATGCGCTCTC GGCGCTGGGA
ACGGCGCTGC TGCAAGGGGT CGCGGAAGGC GCTGAGGCGC GGGTGCAACT TGATGCCATC
TTGCTCGCTA CGCTGACGTC GATCGCGGTC GGACTAATCT TCGGCATTTA TCCCGCCGTG
CGCGCGTCGC GCCTCAATCC GATCGATGCG CTCAGGTATG AGTAG
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| Protein sequence | MNLVETIRIA LSSLSANKLR SALTMLGIII GVGAVITLLA LGGAIQTLVT RELQGLGSNL
VFVFPGTNDP EQNRRVPPRL TNEDVAALAD PLNVPAAAAV TPQLTRGALI VYAGAGFDGR
VAGVTPNYPQ VRNARVVSGR FFDQTELDLR SRVAVIGADV RASLFPDEDP IGKRIRINDV
SFEVIGEMAP RGGNFGPSED NLVFVPITTA QTRLFPPPPG AVSRIDVSVV YIQAVDERRI
DDVIDQVTEV LRRRNGLTFQ DNNFTIVTQQ DLIASFGTIT GALTAFLGAI AAISLLVGGI
GIMNIMLVSV TERTREIGLR KAVGARRRDI RFQFVIEATM LSLLGGLLGI ALGYALSALG
TALLQGVAEG AEARVQLDAI LLATLTSIAV GLIFGIYPAV RASRLNPIDA LRYE
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