| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1117 |
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| Symbol | |
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| ID | 5538583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1451898 |
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| End bp | 1452251 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893251 |
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| Product | anti-sigma-factor antagonist |
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| Protein accession | YP_001431234 |
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| Protein GI | 156741105 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.113154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.94353 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTCC TGAGTGAGCC TTGTGATGAT GGCATCACCA TTGTGCGGAT GGACGGTCGC
CTCGATCTGG TTACGGCGGC GCAGGTCAAG CAACAACTGA CTGAACTGGT CGCCAGTGGT
CATCGACGAT TGATCTTCGA TCTGGATCGC GTCAGTTTCG TAGATAGTTC CGGACTTGGC
GCGCTGATCA GCGGGCTGAA GGTTGCGCGG CAGGCGGGTG GCGACCTGCG GATCGCGCGC
GCCAATCAAC AGGTGCGCAC ATTGCTCAAC TTAACGATGC TGGAGCGAGT CTTGCGACCT
TACGAGACGC TCGAGGAGGC ACGCGCTGGC TACTCCCAGA TCGTTGCTGA TTGA
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| Protein sequence | MTLLSEPCDD GITIVRMDGR LDLVTAAQVK QQLTELVASG HRRLIFDLDR VSFVDSSGLG
ALISGLKVAR QAGGDLRIAR ANQQVRTLLN LTMLERVLRP YETLEEARAG YSQIVAD
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