Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1111 |
Symbol | |
ID | 5538577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1439991 |
End bp | 1440476 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893245 |
Product | NUDIX hydrolase |
Protein accession | YP_001431228 |
Protein GI | 156741099 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.508433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTCGGTA AACCATCGTT GCTTGCTCAT CACAAACCCA TCTATGCCGT TGGCGCGGTT GCCTATCGCT ATGACGCTCG TGGACGATTG CAGGTATTGG TGATCAAAAA GCGCAACGGT TACTGGACGC TGCCCAAGGG CGGGGTGCGT CCAGGCGAAG AGCATGCCAC AGCGCTGTTG CGTGAGTTGC GCGAAGAGAC CGGACTGGTC GGCATTGTCG AAGATGAAGT CGCGCAGGTT CAATATATCA CGCCGCGGCG GCGACTCCCA CGACGCAAGA TTGTGACATA CTATCTGGTG CGCGTTGCAT TGGACGCGAT TGCCATTCCT GGCGCGCATC CCGGCGAAGT GATCGAACAG GTGCGTTGGG TGCGACCGCA AGGGGCGCAA CGGCGGGTCA AACGCAAACG GATTCGCAAC ATCATCGCGC GCGCAGAAAC ATGCTTACGC GCGCGCAATG ATCAGAGTGT AACAGAATCT CAATGA
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Protein sequence | MVGKPSLLAH HKPIYAVGAV AYRYDARGRL QVLVIKKRNG YWTLPKGGVR PGEEHATALL RELREETGLV GIVEDEVAQV QYITPRRRLP RRKIVTYYLV RVALDAIAIP GAHPGEVIEQ VRWVRPQGAQ RRVKRKRIRN IIARAETCLR ARNDQSVTES Q
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