| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1110 |
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| Symbol | |
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| ID | 5538576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1437043 |
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| End bp | 1439859 |
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| Gene Length | 2817 bp |
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| Protein Length | 938 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893244 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001431227 |
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| Protein GI | 156741098 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase
[COG2608] Copper chaperone |
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| TIGRFAM ID | [TIGR00003] copper ion binding protein
[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0214095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATATC TGATATTTGC AACAATCGGA AAAGTAACGA TGCCTGAACA AACGATACAT
CTTGCCGTCA CCGGCATGAC CTGCGCCTCC TGCTCGGCGC GTGTCGCAAA GGCGTTGAAG
AAGGCGCCCG GCGTGACAGA TGCGACGGTT AACCTGGCGA GTGAGCAGGC GGAAGTGCAT
TTCGATTCGT CCCTGGTGAC GCCGGACCGC CTGATCACGG CGGTTGAGGA AGCCGGGTAC
GGCGTGATCA CCGAACATGT CGATATTCCG ATCACCGGCA TGACCTGCGC CTCGTGCGCG
GCGCGGATCG AAAAGGCGTT GCGCCGCGTT CCCGGCGTCA TTGATGCCGC CGTCAATCTG
GCGAGCGAGC GTGCCACAGT AACGTTCACG CCGGCGGATG TCACCTGGAG CGATCTGGTT
GCTGCGATTG AAGATGCCGG GTATGGCGTG ATCGACCAGC GCACCGCAGC GGATGCTGGC
GAAGATGGCG AGGCGGCGGC GCGCGCGCGC GAACTGGCAA ACCGCCGTCG GACATTGACG
GTCGCTGTCG TTCTGACGGC GCCGCTCTTC CTGCTTTCGA TGGGGCGCGA CCTGGGGTTG
ATCATGCCCT GGCTGATCGG CGCGGGCGCG GAGATGGCAC GCTCCATGAG CGGACCACTC
CACGAGATGA TGAACCATAT CGCAGCGCGC GATGATCTGC TCAACTGGCT GTTCATGATC
CTGGCGACGC CGGTGCAGTT TTATGCCGGG CGCGATTTCT ACGTCCACGC CTGGAAAGCG
CTGAAGAACC ATCGCACGGC GACCATGGAC ACGCTCATCG CCGTTGGGTC GTCGGCGGCG
TACTTCTACA GCGCAGCGCT GATGGTCACC GGCATGGCGG GACACGTCTA TTTCGAAACA
GCAGCGGTGA TTATCACCCT CATTCTGGTG GGGAAATACC TGGAAGCTCG CGCAAAGAGT
CAGACCGGCG CCGCAATCCG GGCGCTGATC GGGTTGCAAC CAAAAATGGC GCGTGTGGTG
CGCGGTGGTC GCGAAGTGGA CATTCCAGCC GCCGATGTGC GTCGCGGTGA TATCGTTGTT
GTGCGCCCCG GCGAGAAAAT ACCGGTCGAT GGCGTCATCA TCTCCGGCTC GTCGGCAGTC
GACGAGAGCA TGATCACTGG TGAGAGCATG CCGGTGGAGA AGCGTGAGGG GGATACGGTC
ATTGGTGCGA CGCTGAACCG CAGCGGCGGT TTCCAGATGC GCGCAACACG GGTTGGCAGG
GAGACGGCGC TGGCGCAGAT CATTGCGCTA GTGCAGCAGG CGCAGGGGAG CCGCGCGCCG
GTGCAGCGCC TTGTCGATCA GGTGTCTGCC GTGTTCGTGC CGATAGTCCT GCTGGTTGCG
CTCTTGACCT TTCTTGGCTG GTTCTTCATT GGCGGAACGG GATTCACACA GGCGATGATT
TTTGCCGTGG CGGTGCTGGT CATCGCCTGC CCCTGCGCGC TTGGCCTGGC GACGCCGACA
GCCATCATGG TGGGGGTTGG CACGGGTGCG GCGCATGGCA TTCTGATCAA GAATGCCGAA
AGCCTGGAAC GCGCCGGAAA AGTGCAGACG GTTGTGCTCG ACAAAACCGG CACGGTGACC
GTCGGCAAGC CGGCGGTCAC CGACATTGTC GTTCACGCGA CAGATGCGCT GGCGTCTGTT
GTGCAGAGCG CACCCTTGAT CCAGACGCAG GCAGATGACA GTGTGCATCC AAATGGCTCG
CAAGACGTTG TTCGTCAGAC ATCTGATGCT ACGGCGATGG CAACGATCCA TGGCATTTCC
GTCGCTGCTG CCGATCTCGG TGATCGGCGC GCGGATCTCG AACAGTTCCT GAAGAGCGTG
GGAGATGGCG ACCTTCCTGA TGCTCATCCG CTGTCCGCAG CCGTCACCCG CGTCGCGCAA
CAACGTACCG AACTGCTGAG ACTGGCGGCG AGCGCTGAGT CGCGCAGCGA ACACCCGCTC
GGCGAAGCTA TTGTGCGCGC GGCGCAGGAC GCAGGCATCA GCGTTGTCCA GCCTGAACGC
TTTGAAGCGA TTGCCGGGCA CGGCGTGATT GCCTTGGTCG AAGGGCGGAC GATCGTGATC
GGCAACCCGG CGCTGATGCT CGATCGCGGC ATTGATACCT CGGCGCTCGA CGCGCATGTG
GCGCGCTTGC AGAGTGAAGG CAAAACGGCA ATGATTGTCG CTGTCGATAG AATGGCAATG
GGCGTCATTG CCGTCGCCGA TACGGTCAGG CACACGTCGC GCGCGGCAGT CGAAACGTTG
CACCGCCGGG GAATTGACGT ATTGCTGATC ACCGGCGACA ACCGGAGAAC AGCGGAAGCG
ATTGCGCGTC AGGCGGGGAT CGATCGGCAC AAGGTGTACG CCGAAGTTCG TCCAGAAGAC
AAGGCGCGCA TCGTCCGCGA GGTGCAAGAA GGTGCAGGGA TGCGCCGGAT TGTCGCCATG
GTCGGCGACG GAATCAACGA CGCGCCAGCG CTGGCGCAGG CGGATGTCGG CGTTGCTATG
GGCAGCGGCG CCGATGTGGC GCTGGAAACC GCCGATATTG CTCTTATGCG CGGCGATCTG
CATGGTGTGG CGCAGGCAAT CGATCTCAGC CGGCGCACCC TCCAAACGAT TCGCTGGAAC
TTGTTCTGGG CGTTTATCTA CAACGTCTTG CTCATCCCGG TCGCTGCTGG TGCGCTCTAC
CCCTTTACCG GCTGGCAATT GAACCCCATG CTGGCAGCTG GCGCAATGGC GTTCAGTTCG
GTCTTCGTTG TGACCAACTC ACTGCGGTTG CGGCGGGCGC TCAGTGTTGA ACGTTGA
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| Protein sequence | MLYLIFATIG KVTMPEQTIH LAVTGMTCAS CSARVAKALK KAPGVTDATV NLASEQAEVH
FDSSLVTPDR LITAVEEAGY GVITEHVDIP ITGMTCASCA ARIEKALRRV PGVIDAAVNL
ASERATVTFT PADVTWSDLV AAIEDAGYGV IDQRTAADAG EDGEAAARAR ELANRRRTLT
VAVVLTAPLF LLSMGRDLGL IMPWLIGAGA EMARSMSGPL HEMMNHIAAR DDLLNWLFMI
LATPVQFYAG RDFYVHAWKA LKNHRTATMD TLIAVGSSAA YFYSAALMVT GMAGHVYFET
AAVIITLILV GKYLEARAKS QTGAAIRALI GLQPKMARVV RGGREVDIPA ADVRRGDIVV
VRPGEKIPVD GVIISGSSAV DESMITGESM PVEKREGDTV IGATLNRSGG FQMRATRVGR
ETALAQIIAL VQQAQGSRAP VQRLVDQVSA VFVPIVLLVA LLTFLGWFFI GGTGFTQAMI
FAVAVLVIAC PCALGLATPT AIMVGVGTGA AHGILIKNAE SLERAGKVQT VVLDKTGTVT
VGKPAVTDIV VHATDALASV VQSAPLIQTQ ADDSVHPNGS QDVVRQTSDA TAMATIHGIS
VAAADLGDRR ADLEQFLKSV GDGDLPDAHP LSAAVTRVAQ QRTELLRLAA SAESRSEHPL
GEAIVRAAQD AGISVVQPER FEAIAGHGVI ALVEGRTIVI GNPALMLDRG IDTSALDAHV
ARLQSEGKTA MIVAVDRMAM GVIAVADTVR HTSRAAVETL HRRGIDVLLI TGDNRRTAEA
IARQAGIDRH KVYAEVRPED KARIVREVQE GAGMRRIVAM VGDGINDAPA LAQADVGVAM
GSGADVALET ADIALMRGDL HGVAQAIDLS RRTLQTIRWN LFWAFIYNVL LIPVAAGALY
PFTGWQLNPM LAAGAMAFSS VFVVTNSLRL RRALSVER
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