Gene Rcas_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_1080 
Symbol 
ID5538546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1398657 
End bp1399574 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content58% 
IMG OID640893215 
Productsite-specific DNA-methyltransferase (adenine-specific) 
Protein accessionYP_001431198 
Protein GI156741069 
COG category[L] Replication, recombination and repair 
COG ID[COG0863] DNA modification methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGAAG CGCAGCACTT TATGATCGAC CACAACACCA CCGGCGCCAT CTATCTGGCG 
GACAATCTTG ATATTCTCCG CGCTCTTCCT TCCGGGTCCG TCGATCTGAT CTACATCGAC
CCCCCCTTCA ACACCGGCAA GCATCAGCAG CGCGTCCAAC TCAAAACGGA GCGTTCCGAC
GATGGCGACC GCGTGGGATT CCAGGGACAG CGGTACAAAA GCATCATCCT GGGATCACGA
CGGTTCAGTG ACGTGTTCGA CGATTATCTG GCATTCCTGG AGCCGCGCCT GGTCGAAGCG
CATCGCGTGT TGGCGCCATC TGGGTCGTTC TACTTTCACG TGGATTACCG GGAGGTCCAC
TATTGCAAGG TGCTGCTCGA CGCCATATTC GGGCGTGAGT CGTTTTTGAA CGAGATTATC
TGGGCATATG ACTATGGCGG ACGACCAAAG AACCGCTGGC CCCCCAAGCA CGACAATATT
CTGCTCTATG TCAAAAACCT CTCCCGCTAC GTGTTCAATG TCGATGAAAT TGAACGCATC
CCCTACATGG CGCCGGGGTT GGTCGGTCCT GAAAAGGCGG CGCGCGGTAA ATTGCCAACC
GATTGCTGGT GGCACACGAT TGTGCCCACC AACGGCGCCG AAAAGACCGG CTACCCGACG
CAGAAGCCAC TCGGTATTCT GCGCCGGATC GTTCAGGCAT CGTCGAAGCC GGGATCGCTG
GTGCTCGATT TCTTTGCCGG CAGCGGCACG ACAGGGATTG CGGCGCTCGA ACTCGGACGG
CGCTTCATCC TGGTGGACAA CAACCCCGAA GCGCTGGCAG TCATGGCACG CCGCTTCGAC
GGCGTCGCAG GAATCAGGTG GGTCGGCTTC GATCCTGCAC CGTACCAGCA GCAGACAACA
GCACCTATTA TTCCATGA
 
Protein sequence
MREAQHFMID HNTTGAIYLA DNLDILRALP SGSVDLIYID PPFNTGKHQQ RVQLKTERSD 
DGDRVGFQGQ RYKSIILGSR RFSDVFDDYL AFLEPRLVEA HRVLAPSGSF YFHVDYREVH
YCKVLLDAIF GRESFLNEII WAYDYGGRPK NRWPPKHDNI LLYVKNLSRY VFNVDEIERI
PYMAPGLVGP EKAARGKLPT DCWWHTIVPT NGAEKTGYPT QKPLGILRRI VQASSKPGSL
VLDFFAGSGT TGIAALELGR RFILVDNNPE ALAVMARRFD GVAGIRWVGF DPAPYQQQTT
APIIP