Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_1077 |
Symbol | |
ID | 5538543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1396095 |
End bp | 1396355 |
Gene Length | 261 bp |
Protein Length | 86 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640893212 |
Product | transglycosylase-associated protein |
Protein accession | YP_001431195 |
Protein GI | 156741066 |
COG category | [S] Function unknown |
COG ID | [COG2261] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACCCA TTTCCTGGAT TATTTTCGGC GCACTGGCCG GATGGGTTGC AAGCCTGCTC GTCGGCATCG AGGAACGCCA GGGATGCCTG ATGAATATCA TCATCGGCAT CCTGGGCGCA TTCGTTGGCG GACTGATTAT GGATCTGCTG GGATTCGGCG GAACGAATTT CGGATGGGAT GTGCGCAGTT TTGGCGTGGC AGTGCTGGGA GCGATCGTTC TGCTCGCCAT CACCGGACAG ATTCGGCAGC GCCGGCGTTA A
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Protein sequence | MGPISWIIFG ALAGWVASLL VGIEERQGCL MNIIIGILGA FVGGLIMDLL GFGGTNFGWD VRSFGVAVLG AIVLLAITGQ IRQRRR
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