| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1076 |
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| Symbol | |
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| ID | 5538542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1394118 |
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| End bp | 1395752 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893211 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_001431194 |
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| Protein GI | 156741065 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAGGA ACCAGAAAAC CCTATTCGAT ACGCAGCGCG AGGAAGCGTT GAGCCGTCAG
GCGCCGCTCG CCGCGCGCAT GCGCCCGCGC GCGCTCGATG AGTTTGTCGG GCAGGATCAC
ATCGTCGGGG AAGGTAAATT GCTGCGGCGC GCCATCACCA ACGATGCGCT CTTCTCGATC
ATTCTCTGGG GTCCGCCCGG CTCTGGCAAG ACGACCCTGG CGCGGATCAT TGCCGATACG
ACGCATGCCC ATTTTGAGCA ACTTTCTGCG GTGTCCGCTG GAGTCGCCGA TCTCCGTCGC
GTGGTCAAGG AAGCGCAGGA CCGCCTCGGC ATGTTCCAGC AGCGCACGAT TGTCTTCATT
GACGAGATTC ATCGTTTCAA CAAGGCGCAG CAGGATGCGA TCCTGCCCTA TGTCGAGGAT
GGCACGATTA TTCTGATCGG CGCGACGACC GAAAACCCGT CGTTCGAGGT CAACCCGGCG
CTGCGCTCAC GGGCGCGCGT CTTCGTCCTC GAATCACTGA CCGATGAGCA GATTGGCGTG
ATTGTTGATC GAGCGTTGAC CGATGCCGAA CGCGGGCTTG GCGCCCTCAA CGTGCTGCTG
GCTGCCGATG CGCGCGGGTA TCTGATCAAT ATGTCGAACG GCGATGCACG CACGGCGCTG
AATGCGCTCG AAGCCGCAGC GCTCGCCAAA TCGCCAGGCA TCGGCGGGAA GCGCCTGCTT
ACAGTGGACG ACATCCGCGA TGCGTTGCAG AGCCGCGCGG TACAGTACGA CAAGAATGGC
GAGCTGCACT ACGATGCAAT CTCAGCATTG CACAAAAGCG TCCGTGATAG CGATCCCGAC
GCGGCACTGT ACTGGCTTGG GCGTATGCTC GACGGCGGCG AAGACCCGCT GTATATTGCG
CGACGGGTGG TGCGCATGGC AATCGAGGAT ATCGGCATGG CCGATCCGCA CGCGCTGCCG
CTGACGATCG CTGCTCAACA GGCAGTTCAT TTTCTCGGTC AACCCGAAGG CGACCTGGCG
CTGGCGCAGG CGGTCGTCTA TCTGGCGCAG GCGCCAAAGA GCAACGCAGT CTATGTCGCA
TACGCCGCAG CGCTCAATGA TGTGGCGGAG ACGCGCAATG AGCCGGTGCC GCTTCACCTG
CGCAACGCGC CTACCGCGTT GATGAAAAGG CTTGGATACG CGCGTGGCTA TAAGTATGCG
CACGACGATG ACGATGCACA GGCGGAGACG CGCAATGAGC CGGTGCCGCT TCACCTGCGC
AACGCGCCTA CCGCGTTGAT GAAAAGGCTT GGATACGCGC GTGGCTATAA GTATGCGCAC
GACGATGACG ATGCACAGGT AGAACAGGAA CACTTCCCGC CCAATCTGCG CGGACGGCGT
TATTACGAAC CGACCGGGCG CGGGTTCGAG GCGACGGTGC GAGAACGCCT TGCCTGGCGC
GATGCGCGCG CGTCGCATGG AACTGCGAAA GGGGTCTCTA GAGAAGAACG CACCAGGTCA
GCAACAGGTC AGAACCACAC CCCTTCCGAT CTCGATCCGC AGGCGCTGGC CGGCGAAGAG
CCGCAAATCC CGGCGGACGA CGTCGCCGAA ACGCGACACG TATCCCGCTC GCCATCACGT
CGTCGGTCGA AGTGA
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| Protein sequence | MPRNQKTLFD TQREEALSRQ APLAARMRPR ALDEFVGQDH IVGEGKLLRR AITNDALFSI
ILWGPPGSGK TTLARIIADT THAHFEQLSA VSAGVADLRR VVKEAQDRLG MFQQRTIVFI
DEIHRFNKAQ QDAILPYVED GTIILIGATT ENPSFEVNPA LRSRARVFVL ESLTDEQIGV
IVDRALTDAE RGLGALNVLL AADARGYLIN MSNGDARTAL NALEAAALAK SPGIGGKRLL
TVDDIRDALQ SRAVQYDKNG ELHYDAISAL HKSVRDSDPD AALYWLGRML DGGEDPLYIA
RRVVRMAIED IGMADPHALP LTIAAQQAVH FLGQPEGDLA LAQAVVYLAQ APKSNAVYVA
YAAALNDVAE TRNEPVPLHL RNAPTALMKR LGYARGYKYA HDDDDAQAET RNEPVPLHLR
NAPTALMKRL GYARGYKYAH DDDDAQVEQE HFPPNLRGRR YYEPTGRGFE ATVRERLAWR
DARASHGTAK GVSREERTRS ATGQNHTPSD LDPQALAGEE PQIPADDVAE TRHVSRSPSR
RRSK
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