| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1071 |
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| Symbol | |
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| ID | 5538537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1389315 |
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| End bp | 1389971 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640893207 |
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| Product | SOS-response transcriptional repressor, LexA |
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| Protein accession | YP_001431190 |
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| Protein GI | 156741061 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.559987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGATCGT CAGATCAACT TTCAGCGCGG CAGCGCGATA TCCTTGCATT CATTGAAGCG
TTCACCCAGG AGCATGGCTA TCCGCCGTCC ATCCGCGAGA TCCAGGATGG TCTGCACATT
TCCTCGACCT CGGTCGTCGC CTACAATCTT CGGGCGCTGG AAAGCAAGGG ATTAATCGAC
CGCGATGGCA GAGTATCGCG GGGCATCAAA CTCAAGAATA TGCTGCCGGT CGCGCTCAAT
CCGGCGCGAG GCGGAAGAGT GCCGCTGCTT GGCGTTATTA CCGCCGGTCA GCCGCTGCCC
AACCCGGAAG ACACCAGCAC TGCGGCAGTT GAAATGATCG AGGTGCCGCC CGATGTCGCA
CCGCCTGAGA AGTTGCAGGA TGTCTACGCC TTGAAAGTGC GCGGGCACTC GATGATCGAT
GCGCTGATCG ACGATGACGA CATTGTGTTG CTGCGCTACC AGGAGACGGC TGAGAATGGC
CAGATGGTTG CGGTGCGCAT CGAAGACGAT AATGCGGTGA CGCTCAAGCG CTTCTATCGC
GAGGGCGATA AGGTGCGCCT GCAACCTGCC AATGTGACGA TGGAGCCGAT CTATGTCGAT
GCGACAAAAG TTCATATTCA GGGTCGTGTC GTCGGAGTGA TGCGATCCAT GTGGTAG
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| Protein sequence | MRSSDQLSAR QRDILAFIEA FTQEHGYPPS IREIQDGLHI SSTSVVAYNL RALESKGLID
RDGRVSRGIK LKNMLPVALN PARGGRVPLL GVITAGQPLP NPEDTSTAAV EMIEVPPDVA
PPEKLQDVYA LKVRGHSMID ALIDDDDIVL LRYQETAENG QMVAVRIEDD NAVTLKRFYR
EGDKVRLQPA NVTMEPIYVD ATKVHIQGRV VGVMRSMW
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