| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1064 |
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| Symbol | |
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| ID | 5538530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1380914 |
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| End bp | 1381945 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893200 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001431183 |
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| Protein GI | 156741054 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGATA CTTCGACCGA CCTGATTCAG GTGCGCAACC TGAAGATGCA TTTTCCGGTG
ATGAAGGGCG CGATTATCAA GCGCACCGTC GGGCATGTCA AAGCGGTTGA CGGAGTGACG
TTCTCGATCA AGCGCGGCGA GACGTTAGGG CTTGTGGGAG AGAGCGGATG CGGCAAATCG
ACCACCGGAC GCGCCATTCT GCAACTCTAC AAGCCAACCG CCGGCGAAGT GATCTTCCAG
GGCGCCGATC TGACCCGTCT TCAGGGTGAA GAGTTGCGCC GCATGCGGCG TAAGGTGCAA
ATGATCTTTC AGGACCCGTA TGCTTCGCTC AATCCGCGGA TGACGGTCGG CGACATTATC
GGCGAGCCGA TTGCCGTGCA CAATCTGCGC CAGGGAAAGG CTGCCATCCG TGAACGGGTG
CAGGAATTGC TCGAACTCGT CGGTCTCAAT CCGTACTTTA TCAACCGCTA CCCCCACGAA
TTCTCCGGCG GGCAGCGGCA GCGCATCGGC ATCGCGCGCG CGCTGGCGGT CGAACCGGAG
TTCGTGGTGT GCGACGAGCC GGTGTCGGCA CTCGATGTGT CGATCCAGGC GCAGGTGCTT
AATCTGCTCG AAGACCTTCA GCATCGCCTG GGTTTGACGT ACCTGTTCAT CGCGCACGGT
CTGGCAGTCG TAAAGCATAT CAGCGACCGG GTGGCAGTGA TGTATTTGGG GAAGGTCGTC
GAACTGGCGG AGGGAAAGAC ACTCTACGCC ATGCCGATGC ATCCCTACAC GCAGGCGCTC
CTGTCCGCTG CTCCCATTCC CGACCCGACG GTCGAGCGGA AACGGCAACG CATCATCCTG
GAAGGCGATG TGCCAAGTCC GCTCAATCCA CCTCCGGGAT GCCATTTTCA CACCCGTTGC
CCGATTGCCA TCGACCGCTG CAAGGTCGAG GAGCCGCCCT TCGAGGATTA CGGTGATGGG
CATTTCGTCG CCTGCTGGCG TGCGCGCGAG TCGATTGAGT TGATGGAACG GCACGCGGTG
CGTCCGTCGT AG
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| Protein sequence | MSDTSTDLIQ VRNLKMHFPV MKGAIIKRTV GHVKAVDGVT FSIKRGETLG LVGESGCGKS
TTGRAILQLY KPTAGEVIFQ GADLTRLQGE ELRRMRRKVQ MIFQDPYASL NPRMTVGDII
GEPIAVHNLR QGKAAIRERV QELLELVGLN PYFINRYPHE FSGGQRQRIG IARALAVEPE
FVVCDEPVSA LDVSIQAQVL NLLEDLQHRL GLTYLFIAHG LAVVKHISDR VAVMYLGKVV
ELAEGKTLYA MPMHPYTQAL LSAAPIPDPT VERKRQRIIL EGDVPSPLNP PPGCHFHTRC
PIAIDRCKVE EPPFEDYGDG HFVACWRARE SIELMERHAV RPS
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