| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1057 |
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| Symbol | |
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| ID | 5538523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1370983 |
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| End bp | 1373139 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893193 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001431176 |
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| Protein GI | 156741047 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.108149 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.980645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAGCC AAAAATCGCG CACAGCGATT GACAATGCGC ATCGAGGCGC TACAATACAC
GTCAAAGGGA TACGGTTCAA GACGATGTAC GCACTCTCGC GCACAACCCC GGCTCTTCCT
CTCATTCTGA GCGCTGCGCG CCTGCTGGCC GGCGAGCAAC CGCTGACTGC GCGCCTGATC
GGGTTGTTCG ATCTGCTGCG CCAGGCGATT GCATTCCACG ACGCGCGCAT CACCTGGTGG
CGGCACGAGC CGGTTGCTGC GGCAACCGGC GAGCAGTGGT ACGCTCCAAA TGGTTGGAGC
ATTCCCTGGA GTGATGACAT TCTGCGCGAA GTCATCGAGC GCGGCGCCAC TTTGCAGAGC
GCCGCCCGCC ACGACATCGT CCACTATGGC GCGCCGATTG TCTGGGATGG ACGGCTGTGG
GGCGTACTCG AACTGCGCGG CAGCGAGATG CATGTTGGCA ACGAAGAACA GGCGCTGATC
CACGCGCTGA CGCCGCTGCT GGCAGCCACA ATTGCTGCGG GGCGCGGGGA TGGCGACACG
CGAGCGTTGA CGGAGCGGCA GCAGCGCGTC ATCGAGATGG TGCGCGCCGA ACTTGAAGCG
CCGCTTGCCC TAGGTGAACT GCTGACCTTT CTGCTGCGCT GGGCGCTTGA TGCAACCGGC
GCAGAGGCGG GCGCCATCGC TCTGGTCGAT CGCGAACGGG GGGAACTGGT GCTGCATGCA
TACGAAGGGT ATGGCGGCGA TCCGCTCAAC CGCGACGCCT TCGGTGAAGC GCGACGGCGC
TGGAGTTGGG AGGTTGGCGT CGCCGGCAAA GTGGCGCGCA CCGGGCGAGC CACGCTCCTG
CGGGATGTAT CACGTGACCC GGATTATCGC GCGTTCGCCC CAGAAGTGCG CGCGGAACTG
GCTGCGCCAA TCGGCGCCGA TCCGCCGCTC GCCGTGCTCC TCCTCGATAG CCCGCGCTCG
GTGGCATTTG GCGAGAGCGA GGTGGCGTTC GTCGATGCAC TGTGTCATCT GGCGGTCAAT
CCGCTGCGTC GCGCGCTGCA CTATCAGCAG TTGCTCGAAA CCAGCGCCCA TCTCGGTCAG
GTCTTCGCCA GTATGCCGAA TGGATTGGTG CTGATGGATC AGCAGGGGCG CGTGTTGCGC
CACAACCCGG CGTGGCTGAT GATCTGGGGA TTGACTCCCG ACGCGATGCG CGATCCGTTC
TATATTCCCC TTGATCTTGT GCCGCTGTTG CTGCCCCGCA TGCGTGATCC GCTGGCGCTG
ACAGAACTAT GCGCCGAGGG TCAACGTTCG CCCACTGAGG TTCAGTCGTT ATTGGTGCGG
CTGAACAACC CGCATCAGGA GGTGATGCTC CTTTCGGCGC CCACGCGCGA TAGTTTCGGA
TCGTTGACCG GCAGGCTCTG GATTGTCAGC GATGTGACGC GCGAACGTGA GGCGGATCGC
CTGAAGAGCG AATTTCTGTC GATCGTGTCG CACGAACTGC GCACACCGCT CACGTCGATC
ATGGGGTACA CCGAGTTGCT GTTGGCGCGC GATTTCACCC CTGGTGAACA GCGCGAGTTC
GTTAAGACGG TGTACAACGA GGCGAACCAC CTGTATCAGA TCGTCGAGGA TCTGTTGGGA
GTCACGCGGT TGGAAGCCGG AAATGTGCGC CTCGATCGTT GGGCGGTGTC GCTGCGCCAG
ATCATCAGCG ATCTGACGGC GCACCTCAGC AACCAGATCA GCGGCAAACA CACGATGCTG
ATCGATATTC CACCATATCT GCCGCCGGTC TACGCCGACC GCGACAAGGT CCGGCAGGTG
CTGGTCAATC TGATTACGAA CGCGGTGAAA TACTCGCCGA ACGGCGGCGA AATCCGGCTC
ACGGTCACCG AACACGCCGA CCTTCCGCCC GACCATCCGA AGGGGCAGTT TGTCCTGGTT
GCGATCAGCG ACCAGGGGAT CGGCATCGCT CCTGAAGACC TGCCACGCAT CTGGGAACGC
TTCTACCGCG TCGATAATGG CAACACCCGT CGCATCGGCG GGACGGGTCT CGGTTTGTCC
ATCGCCAAGG CGCTCGTCGA ACTACACGGT GGGCGTATCT GGGCGGAGAG CAAACTCAAC
AGGGGGAGCA CCTTCTCCTT CACCCTTCCG GTCGCTACCG ACCTGGTGCG GCGGTAG
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| Protein sequence | MSSQKSRTAI DNAHRGATIH VKGIRFKTMY ALSRTTPALP LILSAARLLA GEQPLTARLI
GLFDLLRQAI AFHDARITWW RHEPVAAATG EQWYAPNGWS IPWSDDILRE VIERGATLQS
AARHDIVHYG APIVWDGRLW GVLELRGSEM HVGNEEQALI HALTPLLAAT IAAGRGDGDT
RALTERQQRV IEMVRAELEA PLALGELLTF LLRWALDATG AEAGAIALVD RERGELVLHA
YEGYGGDPLN RDAFGEARRR WSWEVGVAGK VARTGRATLL RDVSRDPDYR AFAPEVRAEL
AAPIGADPPL AVLLLDSPRS VAFGESEVAF VDALCHLAVN PLRRALHYQQ LLETSAHLGQ
VFASMPNGLV LMDQQGRVLR HNPAWLMIWG LTPDAMRDPF YIPLDLVPLL LPRMRDPLAL
TELCAEGQRS PTEVQSLLVR LNNPHQEVML LSAPTRDSFG SLTGRLWIVS DVTREREADR
LKSEFLSIVS HELRTPLTSI MGYTELLLAR DFTPGEQREF VKTVYNEANH LYQIVEDLLG
VTRLEAGNVR LDRWAVSLRQ IISDLTAHLS NQISGKHTML IDIPPYLPPV YADRDKVRQV
LVNLITNAVK YSPNGGEIRL TVTEHADLPP DHPKGQFVLV AISDQGIGIA PEDLPRIWER
FYRVDNGNTR RIGGTGLGLS IAKALVELHG GRIWAESKLN RGSTFSFTLP VATDLVRR
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