| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1052 |
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| Symbol | |
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| ID | 5538518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1368127 |
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| End bp | 1368522 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893189 |
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| Product | cupin 2 domain-containing protein |
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| Protein accession | YP_001431172 |
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| Protein GI | 156741043 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.379214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGGATCA TCCGAAATGG ATCGCAGCCT TCCAGTAAAG GCTCAGACGA ATATTTTACC
GGCACAGTGC GCTTCGATCC ATTGTTCCTG GCGCCGGATC CAGCGCGCGT GCGCTGCGTC
AGCGTCACCT TCGAGCCGGG CGCCCGCACC GCCTGGCACA CCCACCCGCT GGGGCAGATT
CTGATTGTGA CGTCCGGCTG CGGTCGCGCG CAACGCTGGG GCGGACCGGT GGAAGAGATA
CGGGCGGGTG ATGTGGTCTG GTTCGAGCCG GGCGAGAAAC ACTGGCACGG CGCATCGCCA
ACCACGGCGG TGACTCACAT CGCCATCCAG GAAGCGCTCG ACGGTCAATT CGTTGAGTGG
ATGGAACACG TGAGCGATGA GCAGTACCAA GGTTAA
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| Protein sequence | MRIIRNGSQP SSKGSDEYFT GTVRFDPLFL APDPARVRCV SVTFEPGART AWHTHPLGQI
LIVTSGCGRA QRWGGPVEEI RAGDVVWFEP GEKHWHGASP TTAVTHIAIQ EALDGQFVEW
MEHVSDEQYQ G
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