| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1051 |
|---|
| Symbol | |
|---|
| ID | 5538517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 1366803 |
|---|
| End bp | 1367663 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640893188 |
|---|
| Product | 2,5-didehydrogluconate reductase |
|---|
| Protein accession | YP_001431171 |
|---|
| Protein GI | 156741042 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.191739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACTA TCCCGACAGT CACATTGAAC AACGGTGTCG AGATGCCGAT CCTGGGATTC
GGCGTCTTTC AAATCACCGA TCCCGCAGAA TGCCAGCGCT GCGTACTGGA CGCATTGGAG
ACAGGCTATC GGTTGATCGA TACTGCGGCG TCGTATGGCA ATGAGGCGGC TGTCGGCGCT
GCCATTCGGC GCAGCGGCGT GCCGCGCGAA GACATTTTCG TGACGACCAA GCTCTGGATC
CAGGACGCCG GCTACGAACA AACCAGGCGG GCGTTTGAAC GCTCAATGCA GCGGCTGCAA
CTGGAGTACC TCGATCTGTA TCTGATCCAC CAGCCCTACG GCGATGTATA TGGCGCCTGG
CGTGCCATGG AGGAGTTGTA TCGGGAAGAC CGCATCCGCG CCATTGGGGT CAGCAACTTC
CACCCCGACC GGCTGATGGA CCTGATCGTG CATAACGACG TGGTTCCGGC GGTGAATCAG
ATCGAGTGTC ATCCGTTCCA CCAGCAGATC GAGACCCAGG CTTTCCTGGA AGAACACCAG
GTGCAACTGG AGGCGTGGGG TCCCTTTGCC GAGGGACGAA ACAACATCTT CCAGAACGAG
GCGCTGCGCT CGATTGCGGA GAAGCATCGC AAAACCGTTG CGCAGGTCAT TCTGCGCTGG
CTGATCCAGC GCCGGATTGT GGCGCTTCCG AAATCGGTGC GCAGGGAACG CATCGAGGAA
AACTTCAACG TGTTCGATTT CGATCTCAGC CCGGAGGACA TTGCGGCCAT CGCCACGCTG
GACACGAAAA CCAGCGCCTT CTTTGACCAT CGTGACCCGA AAGTGGTGAA ATGGTTGGGC
GAAGCAAAAC GGCCCACTTA G
|
|---|
| Protein sequence | MSTIPTVTLN NGVEMPILGF GVFQITDPAE CQRCVLDALE TGYRLIDTAA SYGNEAAVGA
AIRRSGVPRE DIFVTTKLWI QDAGYEQTRR AFERSMQRLQ LEYLDLYLIH QPYGDVYGAW
RAMEELYRED RIRAIGVSNF HPDRLMDLIV HNDVVPAVNQ IECHPFHQQI ETQAFLEEHQ
VQLEAWGPFA EGRNNIFQNE ALRSIAEKHR KTVAQVILRW LIQRRIVALP KSVRRERIEE
NFNVFDFDLS PEDIAAIATL DTKTSAFFDH RDPKVVKWLG EAKRPT
|
|---|
| |