| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1022 |
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| Symbol | |
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| ID | 5538488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1331690 |
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| End bp | 1332994 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640893161 |
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| Product | PUCC protein |
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| Protein accession | YP_001431144 |
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| Protein GI | 156741015 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2211] Na+/melibiose symporter and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGGA CAACCATCTT CCGGCTTGGA CTCATCAACG TCGCCGTTGC ACTGACGGCC
GTTCCCATCG AAAGCACGCT CAACCGGGTC ATGATCAGCG AACTGCGGTT GCCTGCCTCG
CTCGTGGCGC TGCTGATCGC GTTGCCCTAC GCTTTTTCGC CGATCCAGAT CTGGATTGGG
TCATTCTCAG ATCGCCATCC CTTGCTGGGG CTTCGCCGCA CACCCTACAC GGTCATCGGG
CTGCTGCTGT GCGCTGGCGG GTCGGCGCTC TCGCCGACGG CGGCATTTGC CATGGCGGAG
AACTTCTGGG CAGGGTTGCC GCTGGGGCTG CTGGCATTCG GCGCGTGGGG CATGGGGTTC
AACTTTGCGA CGGTATCGTA CCTGTCGTTG GCGACGGATC TCTCTGGCGA AGAGCACCGC
GCCCGCACCG TCGGCGTCAT GTGGTTTATG CTGATTGTGA GTGTCATCAT TGCCGGAGTA
AGCCTTTCGC GGATGCTGCG CGACTACACG CCGGCGGCGC TGTTCACGGC GTTCTACGGA
GTGTGCGCTG TTGCGTTGCT GATTGGCATC GCCGCACTCT GGGGGCTTGA AGCGCGCGAC
GACGAAGCGG CGCCCGCTGA GCGGCGCAGT TTTGCGCAGA TGATCGCCAC GGTCGCCGGA
ACGCCGCAGG CACGCCTATT TTTTATCTAT CTGGTACTAC TGCTGATTGC CATCCTGGGG
CAGGACGTGC TGCTCGAACC ATTCGCCGCC GACGTGTTCG GCGTACCGGT TGAAGTCACA
ACGCGCTACA CCTCGATCTG GGGCGCAGCG CTACTGGTTG GACTGCTGGC GACGAGTCCG
CTGGCGCGAC GGCGCGGAAA ACCATTCGCC GCCGCAATCG GCGGAACGCT GGTTGCGATC
GGGTTAGTGT TGATCGCGCT GACCGGCATC CTGGGCATGC CGGAGATCTT CACGCCGAGT
CTGATCCTCT TCGGATTTGG CAGCGGCGTT TCGACCGCCG CGAACCTGGC GCTCATGCTC
GATATGACCA TTCCGGGGCA GATCGGCGCT TTTGTCGGCG CGTGGGGCGT CGCCAATTCG
ATGGCGCGTC TGCTGGGAAC CGTGTTGAGC GGCGTCACCC GTGACATTTT GACCGACCTG
TTCAATGATC GCATGCCCGG ATACGTTATC GTCTTCCTGC TTCAGGCTGC TGCGATGGCG
GCGTCGCTGG CGCTGCTGCC GCGGATCAGC ACCGCGCGCT TCCGCCACGA AATGGCGCCG
TCGGCGCGTG AACTCGCGGC GCTTGCCGGC GAGGCGCAGG GGTAA
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| Protein sequence | MRWTTIFRLG LINVAVALTA VPIESTLNRV MISELRLPAS LVALLIALPY AFSPIQIWIG
SFSDRHPLLG LRRTPYTVIG LLLCAGGSAL SPTAAFAMAE NFWAGLPLGL LAFGAWGMGF
NFATVSYLSL ATDLSGEEHR ARTVGVMWFM LIVSVIIAGV SLSRMLRDYT PAALFTAFYG
VCAVALLIGI AALWGLEARD DEAAPAERRS FAQMIATVAG TPQARLFFIY LVLLLIAILG
QDVLLEPFAA DVFGVPVEVT TRYTSIWGAA LLVGLLATSP LARRRGKPFA AAIGGTLVAI
GLVLIALTGI LGMPEIFTPS LILFGFGSGV STAANLALML DMTIPGQIGA FVGAWGVANS
MARLLGTVLS GVTRDILTDL FNDRMPGYVI VFLLQAAAMA ASLALLPRIS TARFRHEMAP
SARELAALAG EAQG
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