| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_1004 |
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| Symbol | |
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| ID | 5538470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1314333 |
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| End bp | 1315364 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640893147 |
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| Product | quinolinate synthetase |
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| Protein accession | YP_001431130 |
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| Protein GI | 156741001 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0379] Quinolinate synthase |
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| TIGRFAM ID | [TIGR00550] quinolinate synthetase complex, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.529282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACGC AAGACATGTT CGACCTGCTC CGGCGCAAAC TGGGCACACT GGCGCCGGAG
TTCGAGTTGT ATTACAAGGC TGAACTGGCG GTTGAAATCC TGGAACTGAA GAAGCAGCGC
AATGCCGTGA TCCTGGGGCA TAACTACATG GAGCCGGCGC TCTTCCATTC TATCCCCGAC
TTCACCGGCG ACTCGCTCGA CCTGAGCCGC AAAGCTGCCA CAACCGACAA GGACGTGATT
GTGTTCTGCG GCGTGCGCTT CATGGCGGAA ACCGCCAAAA TCCTCAACCC GACGAAGACG
GTGCTGCTGC CGTCGGAGAA AGCCGGATGC TCGCTGGCAG CCAGCATCAC CGCCGCCGAT
GTGCGCATGC TGAAAGCCCG CTTCCCCGGT GCGCCGGTCG TGTCGTATGT CAACACCTAC
GCCGATGTGA AAGCCGAGAG CGACATCTGC TGCACTTCAT CCAATGCTGT GGCGGTCGTC
GAGTCGCTCG AGGCGGATAC GGTGATCTTC CTGCCCGATG AGTATCTGGC GCGCAATGTG
GCGCGCGAAA CCGGCAAGCA TATCATTTTC CCGACGCTGC AACCGGTCAA TGGCGATAAC
CTCCTCGATT ATCAACTGGT CGGCTGGCAC GGGCGCTGCG AGGTGCACGA GAAGTTCACC
GTCGACGACA TCCGGCGTGT GCGCGCGCAG TTCCCCGATG TCGTCATTCT GGCGCACCCG
GAGTGCAGCC CGGAGGTCGT GGAAGCCTCG GATTTCTCCG GCAGCACGAA TGCGATGATT
CGCTATGTGC AGCAAACGAA TGCGCCACAT TACCTGCTGC TCACCGAGTG CGCCATGGGG
GACAACATCG CTGCCGCTAA CCCAGACAAG GATATGCTGC GGCTCTGTAT GGTTCGTTGT
CCGCATATGA ATATGATTAC GCTGGAAGAC ACCCGCGATG CGCTGCGCTA CAACCGCTAT
GTGATCGACA TCCCGGAGGA CATCCGTCAG CGCGCCTACC GCGCCGTGGA ACGGATGATT
CAGATAGGTT AA
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| Protein sequence | MNTQDMFDLL RRKLGTLAPE FELYYKAELA VEILELKKQR NAVILGHNYM EPALFHSIPD
FTGDSLDLSR KAATTDKDVI VFCGVRFMAE TAKILNPTKT VLLPSEKAGC SLAASITAAD
VRMLKARFPG APVVSYVNTY ADVKAESDIC CTSSNAVAVV ESLEADTVIF LPDEYLARNV
ARETGKHIIF PTLQPVNGDN LLDYQLVGWH GRCEVHEKFT VDDIRRVRAQ FPDVVILAHP
ECSPEVVEAS DFSGSTNAMI RYVQQTNAPH YLLLTECAMG DNIAAANPDK DMLRLCMVRC
PHMNMITLED TRDALRYNRY VIDIPEDIRQ RAYRAVERMI QIG
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