| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0996 |
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| Symbol | |
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| ID | 5538462 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1301442 |
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| End bp | 1302632 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893139 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_001431122 |
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| Protein GI | 156740993 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.778544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGA TCATTGCTAC GCTCTTGCTG GCGCTTGTGT TATCCCTCAT TTGGGGATGG
CGTCAGAGAA CTCGTCTTCA ACCGCCTCCA TCATTACCCG AATCACCGGT CCCCTCCCCG
GATGCATTCT CCTCGCTCTT TCACGCTGCT GCTGCTGCGT TCGACGATGG ATTGGTGCTG
GTCGATGCTG ATCGTCGCGT GCAGTATCTC AATGCGCATG CGGAAGAGTT GCTGAACCTC
AGTCGAACGG TGAGCGTCGG GCAGGGGTTG ATCATGCTGG CGCGCGATTA CCAGGTGGAC
GCCATGGTCG AAGAGGCGAT CGCGTCTGCC GAGCCGCGCG AAAGTATCCT TCAACCGCTG
GGAAGACAAC GGACGCTGCG ATTACGAGCG GTTCCACTCG ATCATGGGAC GAAGGGCGCG
CTCCTGCTGG TGCGCGATGT AACGCAACTG AGCCAGCTTG AACGGTCGCG GCGCGATCTG
GTCGCCAATG TGTCGCACGA ACTCCGCACC CCGCTGGCAT CGATCAAGTT GCTGGTCGAA
ACGTTGCAAT CCGATCCGCC GGCGCCGGTG GCACAGCGCA TGCTGAGCCA AATTGCCCAG
GAAGTCGATG CAATTACGCA ACTGGTTGAG GAGTTGCACG AACTATCGCA GATCGAGTCA
GGACGGGTGG CGCTTCAACT CGTGCCCACA CCGCTGGCGC CGCTGGTCGC GCACACAATC
GAACGCATTC GCCCGCAGAT GGAACGGAAG AGCATTCGAG TCATCGCCTG CCTGCCCGAT
GATCTGCCGC CTGCGCTGAT CGATGGGAAC CGCGTCGGTC AGGTATTGCT CAACCTGTTG
CACAACGCCT CGAAATTTAC CCCCGATGGC GGGCAGGTCG CCATCGAAGC CTCGGTGATC
ATGGTAGGCG ACGGTTCACC GCTGCCGCCC GGAATACCAT CGTCGCACCT TCCCGGTCAA
TGGTTGCTGG TCTCGATAGC CGACAACGGC ATCGGTATTC CGGCGCGCGA TCTCGCGCGC
ATTTTCGAGC GCTTCTACAA AGTGGATCGC GCGCGAACGC GCAATGCCGG CGGAACGGGA
CTGGGTCTGG CGATTGCCAA ACATCTGGTC GAGGGGCACG GCGGACGTAT CTGGGCAACC
AGTGTGGAAG GAGAAGGGAG TATCTTCTAT CTCACGTTGC CGGTGGCATA G
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| Protein sequence | MEWIIATLLL ALVLSLIWGW RQRTRLQPPP SLPESPVPSP DAFSSLFHAA AAAFDDGLVL
VDADRRVQYL NAHAEELLNL SRTVSVGQGL IMLARDYQVD AMVEEAIASA EPRESILQPL
GRQRTLRLRA VPLDHGTKGA LLLVRDVTQL SQLERSRRDL VANVSHELRT PLASIKLLVE
TLQSDPPAPV AQRMLSQIAQ EVDAITQLVE ELHELSQIES GRVALQLVPT PLAPLVAHTI
ERIRPQMERK SIRVIACLPD DLPPALIDGN RVGQVLLNLL HNASKFTPDG GQVAIEASVI
MVGDGSPLPP GIPSSHLPGQ WLLVSIADNG IGIPARDLAR IFERFYKVDR ARTRNAGGTG
LGLAIAKHLV EGHGGRIWAT SVEGEGSIFY LTLPVA
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