| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0991 |
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| Symbol | tpiA |
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| ID | 5538457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1293558 |
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| End bp | 1294322 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893135 |
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| Product | triosephosphate isomerase |
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| Protein accession | YP_001431118 |
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| Protein GI | 156740989 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGAACGC CACTTCTCGC AGGCAACTGG AAGATGTACA AAACCACCGG TGAGGCGCGC
GAACTCGTCG AAGGGCTGCT CCACGGGCTT GGCGACGTCG GTGACCGCAA GGTGCTGGTC
TGCCCGCCAT TCACGGCGCT GCAAACGGTG CATGATCTGG TGCAGGGTAC ACCCATCGCA
TTGGGAGCAC AGGATGTCTA CATCGAGCCG CAGGGGGCGT TTACCGGCGC CATTTCTCCG
GTGATGCTGC GCGACCTGGG GTGCGCCTAT GTGATTGTCG GACATAGTGA ACGCCGCGCC
ATTTTCGGCG AAGGGGACGA ATTGATCGGC AAGAAGGTGC GCGCGGCGCT GGCGCACGAT
CTCACGCCGA TCCTGTGCGT CGGCGAGACC AAGCCACAAC GCGACGCCGG GCATGCGGAA
ACTGTCGTCG TTGCGCAGGT GCGCGCCGCG CTCACCGGCA TGACGCCGGA GCAGATCGGT
CGCATTGTCA TCGCATATGA GCCGGTGTGG GCAATCGGCA CCGGCGATAC CGCCACTCCG
GCCGACGCGC AGGCAATGCA CGAAACGATC CGGCGGATCC TTGGCGATAT GGCGGGTTCC
GACACGGCGG CGACGATCAA TATTCTGTAC GGCGGCAGTG TCAAACCGGA CAATATCGAC
GATCTGATGG CACAACCCGA CATCGACGGG GCGCTGGTTG GGGGCGCATC GCTCAAGGCG
GACAGTTTCC TGCGCATTGT CCATTTCCTT TCACCGCAGG AGTAA
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| Protein sequence | MRTPLLAGNW KMYKTTGEAR ELVEGLLHGL GDVGDRKVLV CPPFTALQTV HDLVQGTPIA
LGAQDVYIEP QGAFTGAISP VMLRDLGCAY VIVGHSERRA IFGEGDELIG KKVRAALAHD
LTPILCVGET KPQRDAGHAE TVVVAQVRAA LTGMTPEQIG RIVIAYEPVW AIGTGDTATP
ADAQAMHETI RRILGDMAGS DTAATINILY GGSVKPDNID DLMAQPDIDG ALVGGASLKA
DSFLRIVHFL SPQE
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