Gene Rcas_0984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0984 
Symbol 
ID5538450 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1289693 
End bp1290091 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content65% 
IMG OID640893131 
Producthypothetical protein 
Protein accessionYP_001431114 
Protein GI156740985 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTGG CGAAACACTG GCGTCTGCGC CATGCGCGGT ATCGCCTGGA AGGGCAGCGC 
AACCGACTGA CCGGCGAGGT GCGTTTCCCG CCAGCGCCGC CGCGTCCCGG CGAAGCGGAA
GATACATGGG AGCCGTATCT CCTGAGCGGA CGGGGGCGCG TTTACTCATT CAGCGTGGTG
CGGCAACCGC CGGAAGGGTT CGAGGATCGG ACCCCCTACC TGGTGGCGCT CGTGCGCCTC
GAAGAAGGAC CCATGGTGAC CGCGCAACTG ACTGACTGCG ACCTCGATCA GGCAGCCATC
GATATGCCGG TCGAAATGGT CACCCGCCGC CTGCGCGATC TGGGACCGAC CGGGCTGATC
GTGTACGGCT ACAAGTTCCG CCCTATCATG CAGATGTGA
 
Protein sequence
MDLAKHWRLR HARYRLEGQR NRLTGEVRFP PAPPRPGEAE DTWEPYLLSG RGRVYSFSVV 
RQPPEGFEDR TPYLVALVRL EEGPMVTAQL TDCDLDQAAI DMPVEMVTRR LRDLGPTGLI
VYGYKFRPIM QM