Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0984 |
Symbol | |
ID | 5538450 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1289693 |
End bp | 1290091 |
Gene Length | 399 bp |
Protein Length | 132 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640893131 |
Product | hypothetical protein |
Protein accession | YP_001431114 |
Protein GI | 156740985 |
COG category | [R] General function prediction only |
COG ID | [COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGG CGAAACACTG GCGTCTGCGC CATGCGCGGT ATCGCCTGGA AGGGCAGCGC AACCGACTGA CCGGCGAGGT GCGTTTCCCG CCAGCGCCGC CGCGTCCCGG CGAAGCGGAA GATACATGGG AGCCGTATCT CCTGAGCGGA CGGGGGCGCG TTTACTCATT CAGCGTGGTG CGGCAACCGC CGGAAGGGTT CGAGGATCGG ACCCCCTACC TGGTGGCGCT CGTGCGCCTC GAAGAAGGAC CCATGGTGAC CGCGCAACTG ACTGACTGCG ACCTCGATCA GGCAGCCATC GATATGCCGG TCGAAATGGT CACCCGCCGC CTGCGCGATC TGGGACCGAC CGGGCTGATC GTGTACGGCT ACAAGTTCCG CCCTATCATG CAGATGTGA
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Protein sequence | MDLAKHWRLR HARYRLEGQR NRLTGEVRFP PAPPRPGEAE DTWEPYLLSG RGRVYSFSVV RQPPEGFEDR TPYLVALVRL EEGPMVTAQL TDCDLDQAAI DMPVEMVTRR LRDLGPTGLI VYGYKFRPIM QM
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