Gene Rcas_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0977 
Symbol 
ID5538443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1280471 
End bp1281241 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content62% 
IMG OID640893124 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001431107 
Protein GI156740978 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTGT CTGTCACACG CGACGGATCG ATTGCAATGG TCACGCTCGA CCGTCCCAAT 
GTACACAATG CTTTTGACGC CGCTACCATT GAAGAAATGC GCATCGCGTT CGAGTCGCTC
TCCGGCGATC CAGGGGTACG GGTGATTGTG CTGACCGGCG CAGGCGAGTC GTTCTGCGCT
GGCGGCGATA TGCGCTGGAT GCAGAGCGCC ATGGAGTTAT CCTTCGAGGA GAACATGGCG
GATGCCAGCG CGCTGGCAGC AATGTTCGAG GCGATCTGGA TGTGCCCGAA AGTGGTGCTC
GGTCGGATCA ACGGCGCTGC CATCGGTGGT GGCGCAGGGC TGGTTGCGTG CTGCGATCTG
GCGATTGCCG CCGATACCGC GCGCTTTGGC TTTGGCGAGG TCAAGATCGG GTTGATCCCG
GCGGTCATTG CGCAGTATGT CGTTCCGAAG ATCGGTGTCA GCCAGGCGCG GGCGCTGTTC
GTCTCTGGCG AACGGTTTAG CGCCGAGCGC GCCTTTGAGA TTGGACTGAT CCATGGTGTT
GTGCCACCAG ACGAACTCGA CGCCACCGTC AGGGAGATTG CGCAGCGCTG TCTGACGAGC
GCCCCAGAGG CGATTGTGGC ATCGAAGCGC GTGGTGGATG TGGTGTGGGA AAGTGAGCGG
GATGCGGCGC GGCGTTTTGT GATCGAAATG CTGGCGCGCG TGCGCACGAG CGACGAAGCG
CGTGAGGGGA TTGCTGCCTT CAAAGCGCGG CGGCGCCCGC CTTGGGCGTG A
 
Protein sequence
MTVSVTRDGS IAMVTLDRPN VHNAFDAATI EEMRIAFESL SGDPGVRVIV LTGAGESFCA 
GGDMRWMQSA MELSFEENMA DASALAAMFE AIWMCPKVVL GRINGAAIGG GAGLVACCDL
AIAADTARFG FGEVKIGLIP AVIAQYVVPK IGVSQARALF VSGERFSAER AFEIGLIHGV
VPPDELDATV REIAQRCLTS APEAIVASKR VVDVVWESER DAARRFVIEM LARVRTSDEA
REGIAAFKAR RRPPWA