Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0973 |
Symbol | |
ID | 5538439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1276516 |
End bp | 1277103 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893120 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_001431103 |
Protein GI | 156740974 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.67165 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCACGT CGGCATTTTC CCAACAGTAC GAACAGGCGC TTCAGTTCGC CGCGCGCGCG CACCGGCAAC AGGTGCGCAA GGGAACCGAC ATTCCCTACA TTGCGCATGT GGTGCATGTT TCGGTCATTC TGCTGCGCTA TGGCTTCGAT GAGAACGTGG TCGTCGCCGG GGAGCTGCAC GATGTGGTCG AAGATTGCGG TGTTGCGCCA CAGGAATTGG AAGCGTTGTT TGGCGCAGAC GTTGCGCGCC TGGTCGAAGC GGTGTCCGAG CAGAAGCGGA GCGATGGCAG CGAGCGTTCG TGGGAGGAGC GCAAGACCGG GGCGATTGCC CGCCTGCAAC GCGGCGATCC GGCGATCGCC GCGCTGAAAG CGGCTGATGC CCTGCATAAT ATCCATGCGA TCATGGCAGA CCTGGCGCTG GTTGGGGCTG CGGTGTGGCA ACGTTTCAAG CGTGGTCCTG ATCAGATGCT CTGGTACTAC CGCGAAATCC TGGCGGCGGT TCGCGGCGCG TTGGGCGATC ATCCGATCGT CGCGGAACTT GCCCGCGCAA TTGCCGATCT CGAACATGCG GTTCACGAGT ATAATTGA
|
Protein sequence | MVTSAFSQQY EQALQFAARA HRQQVRKGTD IPYIAHVVHV SVILLRYGFD ENVVVAGELH DVVEDCGVAP QELEALFGAD VARLVEAVSE QKRSDGSERS WEERKTGAIA RLQRGDPAIA ALKAADALHN IHAIMADLAL VGAAVWQRFK RGPDQMLWYY REILAAVRGA LGDHPIVAEL ARAIADLEHA VHEYN
|
| |