Gene Rcas_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0973 
Symbol 
ID5538439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1276516 
End bp1277103 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content61% 
IMG OID640893120 
Productmetal dependent phosphohydrolase 
Protein accessionYP_001431103 
Protein GI156740974 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.67165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACGT CGGCATTTTC CCAACAGTAC GAACAGGCGC TTCAGTTCGC CGCGCGCGCG 
CACCGGCAAC AGGTGCGCAA GGGAACCGAC ATTCCCTACA TTGCGCATGT GGTGCATGTT
TCGGTCATTC TGCTGCGCTA TGGCTTCGAT GAGAACGTGG TCGTCGCCGG GGAGCTGCAC
GATGTGGTCG AAGATTGCGG TGTTGCGCCA CAGGAATTGG AAGCGTTGTT TGGCGCAGAC
GTTGCGCGCC TGGTCGAAGC GGTGTCCGAG CAGAAGCGGA GCGATGGCAG CGAGCGTTCG
TGGGAGGAGC GCAAGACCGG GGCGATTGCC CGCCTGCAAC GCGGCGATCC GGCGATCGCC
GCGCTGAAAG CGGCTGATGC CCTGCATAAT ATCCATGCGA TCATGGCAGA CCTGGCGCTG
GTTGGGGCTG CGGTGTGGCA ACGTTTCAAG CGTGGTCCTG ATCAGATGCT CTGGTACTAC
CGCGAAATCC TGGCGGCGGT TCGCGGCGCG TTGGGCGATC ATCCGATCGT CGCGGAACTT
GCCCGCGCAA TTGCCGATCT CGAACATGCG GTTCACGAGT ATAATTGA
 
Protein sequence
MVTSAFSQQY EQALQFAARA HRQQVRKGTD IPYIAHVVHV SVILLRYGFD ENVVVAGELH 
DVVEDCGVAP QELEALFGAD VARLVEAVSE QKRSDGSERS WEERKTGAIA RLQRGDPAIA
ALKAADALHN IHAIMADLAL VGAAVWQRFK RGPDQMLWYY REILAAVRGA LGDHPIVAEL
ARAIADLEHA VHEYN