| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0970 |
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| Symbol | |
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| ID | 5538436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1274215 |
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| End bp | 1275066 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640893117 |
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| Product | ABC transporter related |
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| Protein accession | YP_001431100 |
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| Protein GI | 156740971 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.653003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCACTG TCGAGCATCT GAGTTTCACC TACGCGGGCG CCGATGCGCC TGCCGTCCGC
GACTTGAGTT TCGAGGCGCG AGCCGGAGAG ATCTTTGGCT TTCTCGGTCC CAGCGGAGCG
GGCAAATCCA CCACGCAGAA GATCCTCATC CGACTCCTGC GCGACTTTTC GGGTGTGGTG
CGGGTGTTGG GGCGCGACCT GCGCGCCTGG AAGAACGACT ACTACGAGCA TATTGGCGTT
TGTTTCGAAC TGCCGAATCA TTACGGGAAA CTGACAGCAC TCGAGAATCT GCGCTACTTT
GGTCGTCTCT ACTCCAACCC GACCGTGCCG CCCGAAACGC TGCTGGCGAT GGTGGGACTG
GAAGAAGATG GCAACCTGCT GGTATCACAG TATTCCAAAG GCATGAAGAT CCGTCTGAAT
CTGGCGCGGG CGCTGATTCA CAATCCACAG ATCCTCTTTC TCGACGAACC GACCGCCGGA
CTCGATCCGG TCAATGCGCG CCGGATCAAA GACCTGATCA ACGCGCAGAA GGAGGCAGGA
CGAACCATTT TTCTGACCAC CCACGACATG ACGATTGCCG ATGAACTGTG TGATCGGGTG
GCTTTTATTG TCGATGGGCG CATTACCGTG ATCGATTCGC CGCGTGCGCT CAAGTTGCGC
TATGGGCGCA AAGCGGTGCG CGTCGAATAT CTGTCGAATG GTCATCCCGT CGTCTGCGAT
TTCCCGCTCG AGGGATTGGC GGATAATTCC GACTTCCTGG CAAGCCTGCG TCATCCGGTG
CAAACGATTC ATACCCAGGA AGCGACGCTG GAACACATCT TTATTCAGGT CACCGGTCGG
AGCCTCATAT GA
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| Protein sequence | MITVEHLSFT YAGADAPAVR DLSFEARAGE IFGFLGPSGA GKSTTQKILI RLLRDFSGVV
RVLGRDLRAW KNDYYEHIGV CFELPNHYGK LTALENLRYF GRLYSNPTVP PETLLAMVGL
EEDGNLLVSQ YSKGMKIRLN LARALIHNPQ ILFLDEPTAG LDPVNARRIK DLINAQKEAG
RTIFLTTHDM TIADELCDRV AFIVDGRITV IDSPRALKLR YGRKAVRVEY LSNGHPVVCD
FPLEGLADNS DFLASLRHPV QTIHTQEATL EHIFIQVTGR SLI
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