Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0967 |
Symbol | |
ID | 5538433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1272398 |
End bp | 1273132 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893115 |
Product | putative esterase |
Protein accession | YP_001431098 |
Protein GI | 156740969 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3509] Poly(3-hydroxybutyrate) depolymerase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.127871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCAGT TGTTGGGTTT CGACGCATAT GCTGATGCGC GCGGTTTCTA TGTGGCGTAC CCGGATGCCT TTCAGCCATC CGGCATTCGT GGAGGCGCGC ACTGGAACGA TGGACGCGGG ACGGCGGGGA TGGTTCAGCG CGGGAGCGAC GACGTGGCTT TCATCAAAGA CATGATCCTC GACATTGGTC GTCGGGTTCC GCTCGACGCC AGCCGCGTGT ATGTCACCGG CGCTTCCAAT GGCGGTATGA TGACCTACCG CCTCGGGTGC GAAACCGGTG GCGTGTTCGC CGGAATCGCT CCGGTCATTG CGAACATGCC GGCGCCGGTG TTTGCCACAT GCGCGCCTCA CGCGCCTCTG ACGCTTCTTG CCATCAACGG CGATGCCGAT CCACTGGTTC CGCTTGCTGG CGGCAACGTC TGTCAGGATG TGCGCTTCGG CTGTGAAGGC GGACAGGTGG CGTCGCACAC TGAGTCGGTG AAGACGTTTG CCATCGCCAA TGCCTGTGAT CCGGTTCCAC AGGTCGAAAC GCTTCCTCAA CAGATTGACG ACGGCACGTT GGTCGAACGT TGGACGTTCC TCAACTGCGC CGACGGCGCA ACCGTCGTTG GGTATATTGT GCGGGGAGGC GGGCACACCT GGCCCCCGCT CCCCGCGCAA CTCGCGGCTT CCGGGGCGCA GAGCCGCAAC CTGGATGCGA CCCGAACCAT TGTGGATGCG TTTTTTCCTG AGTGA
|
Protein sequence | MQQLLGFDAY ADARGFYVAY PDAFQPSGIR GGAHWNDGRG TAGMVQRGSD DVAFIKDMIL DIGRRVPLDA SRVYVTGASN GGMMTYRLGC ETGGVFAGIA PVIANMPAPV FATCAPHAPL TLLAINGDAD PLVPLAGGNV CQDVRFGCEG GQVASHTESV KTFAIANACD PVPQVETLPQ QIDDGTLVER WTFLNCADGA TVVGYIVRGG GHTWPPLPAQ LAASGAQSRN LDATRTIVDA FFPE
|
| |