Gene Rcas_0966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0966 
Symbol 
ID5538432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1271116 
End bp1271967 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content60% 
IMG OID640893114 
Productphosphonoacetaldehyde hydrolase 
Protein accessionYP_001431097 
Protein GI156740968 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01422] phosphonoacetaldehyde hydrolase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.12889 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCCAA TGAGACGACG CGCCTATTGC GGACCGGTTC AGGCGGTGAT CCTCGACTGG 
GCTGGCACAG CGGTTGATTA TGGCTCGTGG GCGCCGGTTG CCGTCTTTCT CCGCCTGTTC
GAGCAGCATG GCGTGACCAT CACGCCAGAA GACGCGCGCG CAGGCATGGG ATTGATGAAG
AAGGATCACC TGCGCGCCAT TCTCGCGCGC CCGACCGTCG CCGCCGCCTG GCGATCCGTT
TCTGGCGCGT CTCCGACTGA GCATGACATC GATGAACTGT TTGCGCAGTT CATCCCGCTG
CAACTGTCCG TTGTGCAGGA CTATGCCATA CCCGTTCCCG GACTGATCGA TGTTGTGAAA
GAAATACGCA AACGTGGGAT AAGGATTGGT TCGACGACCG GGTATCTGCG CGCGATGATG
GACATGCTCG CGCCGGCTGC CGCTGCCCAT GGCTATCGTC CTGATAGCAT CGTCTGCCCC
GATGATGTGC CCGCCGGCCG CCCTGCGCCC TGGATGTGTT TTCGGAATGC CATGCAGTTG
GGTGTTTACC CGATGGCAGC GCTGGTCAAA GTCGGTGATA CGCCGGTGGA TATCGAGGAA
GGATTGAACG CAGGCATGTG GACAGTAGGC GTGACACTGA CCGGCAGCCT GTTGGGATTG
ACACAAACCG ACGTTGATGC GCTCACGCCG TTGGAGCGGG TGGAAGCGCA CACACGTATC
GGTGAGCAAC TCCGCGCCGC AGGAGCGCAT CACATTATCG AAGGCATCTG GGATCTGCCT
CACGCTATCG ATGAGATCGA AGAGCGGCTA CAGCGCGGGG AAACGCCGGT GATGGAATCG
TGGCAATCGT GA
 
Protein sequence
MPPMRRRAYC GPVQAVILDW AGTAVDYGSW APVAVFLRLF EQHGVTITPE DARAGMGLMK 
KDHLRAILAR PTVAAAWRSV SGASPTEHDI DELFAQFIPL QLSVVQDYAI PVPGLIDVVK
EIRKRGIRIG STTGYLRAMM DMLAPAAAAH GYRPDSIVCP DDVPAGRPAP WMCFRNAMQL
GVYPMAALVK VGDTPVDIEE GLNAGMWTVG VTLTGSLLGL TQTDVDALTP LERVEAHTRI
GEQLRAAGAH HIIEGIWDLP HAIDEIEERL QRGETPVMES WQS