Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0957 |
Symbol | |
ID | 5538423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1263610 |
End bp | 1264467 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640893105 |
Product | hypothetical protein |
Protein accession | YP_001431088 |
Protein GI | 156740959 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0203629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGATG ACATTCAGAC CGATAATGCT CCTGATGAAG GTGCGCAACT GCATCCAGAA CAGAAGCAGT ATGATGATCA CTACTTCAAA ATCTTTGAGT CGGCATTAGA TCAGTGCCGG GACTACAAGC CCAGGTTTGG CGGGGGATCT GGTTCAGGAC TTACATTGAA AGAGTTCCAA ACTCTTTATG AAAATGATCC GTTCTACCAT TGGATCGGGC TTGACTCCCC GCTTATGTAT GCTGCACACA AGGCGGCTGG CGGCATTACA TCTGTCTATC GACAGATAGG CATTGCCTGT CAGCGGATTT TCAATCAGAT GGTGCATGAT CATCTTGGAC TATCCTCAGA AGAAGCCGCC TGGAGTTACG TTATCGAGTC TCGGAGACTT TCACTGGATG GGCGTATTGA AATTGATAAA GTGAGGAATG CGGCAGCCCA GCGCAGGGTA CAGCAGTGGA TATGTGACGC CGGGCGTTTG GCTGGTTTAC CGGAAGATAC CTTGCAAGGC ATCAAAGGAT GTGTCTTCGA GGTGCGTCAG GGGTACAAGA GCAAGGACTC AAAACGTCAA AACGCCGACA TCGCCAACGC TGCGAACGCA TATGTGCATA AATATATGCC GGCGATTATA TTGTTTTCAA CCCAGATCGA TAGTGATGTG GCGAAGCGAT ACAAGGAGCG CCACTGGATT ATCCTGACGG GTACGAAGAA TGGTTCGTCT ATCGAAAGCA CGTATGCGTT TTGTCGAAAC GCGATAGGAT ACGATCTGGC TAACTTCTTT GAGTGTCATT CCGAAGACAT CAAAAAATTG GTTAAAGATT TACTCGAAAC GCTACTTTCT CCAGAAGAAC CGGTATAA
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Protein sequence | MTDDIQTDNA PDEGAQLHPE QKQYDDHYFK IFESALDQCR DYKPRFGGGS GSGLTLKEFQ TLYENDPFYH WIGLDSPLMY AAHKAAGGIT SVYRQIGIAC QRIFNQMVHD HLGLSSEEAA WSYVIESRRL SLDGRIEIDK VRNAAAQRRV QQWICDAGRL AGLPEDTLQG IKGCVFEVRQ GYKSKDSKRQ NADIANAANA YVHKYMPAII LFSTQIDSDV AKRYKERHWI ILTGTKNGSS IESTYAFCRN AIGYDLANFF ECHSEDIKKL VKDLLETLLS PEEPV
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