Gene Rcas_0957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0957 
Symbol 
ID5538423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1263610 
End bp1264467 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content48% 
IMG OID640893105 
Producthypothetical protein 
Protein accessionYP_001431088 
Protein GI156740959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0203629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGATG ACATTCAGAC CGATAATGCT CCTGATGAAG GTGCGCAACT GCATCCAGAA 
CAGAAGCAGT ATGATGATCA CTACTTCAAA ATCTTTGAGT CGGCATTAGA TCAGTGCCGG
GACTACAAGC CCAGGTTTGG CGGGGGATCT GGTTCAGGAC TTACATTGAA AGAGTTCCAA
ACTCTTTATG AAAATGATCC GTTCTACCAT TGGATCGGGC TTGACTCCCC GCTTATGTAT
GCTGCACACA AGGCGGCTGG CGGCATTACA TCTGTCTATC GACAGATAGG CATTGCCTGT
CAGCGGATTT TCAATCAGAT GGTGCATGAT CATCTTGGAC TATCCTCAGA AGAAGCCGCC
TGGAGTTACG TTATCGAGTC TCGGAGACTT TCACTGGATG GGCGTATTGA AATTGATAAA
GTGAGGAATG CGGCAGCCCA GCGCAGGGTA CAGCAGTGGA TATGTGACGC CGGGCGTTTG
GCTGGTTTAC CGGAAGATAC CTTGCAAGGC ATCAAAGGAT GTGTCTTCGA GGTGCGTCAG
GGGTACAAGA GCAAGGACTC AAAACGTCAA AACGCCGACA TCGCCAACGC TGCGAACGCA
TATGTGCATA AATATATGCC GGCGATTATA TTGTTTTCAA CCCAGATCGA TAGTGATGTG
GCGAAGCGAT ACAAGGAGCG CCACTGGATT ATCCTGACGG GTACGAAGAA TGGTTCGTCT
ATCGAAAGCA CGTATGCGTT TTGTCGAAAC GCGATAGGAT ACGATCTGGC TAACTTCTTT
GAGTGTCATT CCGAAGACAT CAAAAAATTG GTTAAAGATT TACTCGAAAC GCTACTTTCT
CCAGAAGAAC CGGTATAA
 
Protein sequence
MTDDIQTDNA PDEGAQLHPE QKQYDDHYFK IFESALDQCR DYKPRFGGGS GSGLTLKEFQ 
TLYENDPFYH WIGLDSPLMY AAHKAAGGIT SVYRQIGIAC QRIFNQMVHD HLGLSSEEAA
WSYVIESRRL SLDGRIEIDK VRNAAAQRRV QQWICDAGRL AGLPEDTLQG IKGCVFEVRQ
GYKSKDSKRQ NADIANAANA YVHKYMPAII LFSTQIDSDV AKRYKERHWI ILTGTKNGSS
IESTYAFCRN AIGYDLANFF ECHSEDIKKL VKDLLETLLS PEEPV