Gene Rcas_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0956 
Symbol 
ID5538422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1263134 
End bp1263376 
Gene Length243 bp 
Protein Length80 aa 
Translation table11 
GC content49% 
IMG OID640893104 
Producthypothetical protein 
Protein accessionYP_001431087 
Protein GI156740958 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0315306 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTT TTGATAAGTG CCCTGTTTGT GGGGGTGAAC TAGTTGAGAA GGAAGTAGAG 
AAACTACTCA AAGGCGGTAT TCATACCGCA GTGCTCAAGG TGCATGCGGA TGTATGCCTG
CGATGTGGTG AACGCTTGTA TTCCGTTGAA ACGGTCAGAC GCTTTGAACA GATTCGGCAG
AAACTGGAAC GGCAAGATAC TGCCGAGTTT CAGCCACTTG GTCAGACTTT TCAGGTGGCG
TAG
 
Protein sequence
MNPFDKCPVC GGELVEKEVE KLLKGGIHTA VLKVHADVCL RCGERLYSVE TVRRFEQIRQ 
KLERQDTAEF QPLGQTFQVA