Gene Rcas_0952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0952 
Symbol 
ID5538418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1259337 
End bp1259792 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content62% 
IMG OID640893101 
Productbiotin/lipoyl attachment domain-containing protein 
Protein accessionYP_001431084 
Protein GI156740955 
COG category[I] Lipid transport and metabolism 
COG ID[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.157223 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGC GCGTGCTTAT CGAGGGAACA GCATACGAGG TTGAGATTGT CGATCTCCAT 
TCGCGTCCGG TCGTTGCAAT CGTTGATGGT GAACGCTTCG AGGTCTGGCC CGAGTCCGCT
TCCGCTCTGC CCGTCGGATC GCTCGATGGT CGGCAGGCGC AGGCGCCACC CGCATCCCCG
GCGCCTTCTC TGTCGCCCTC CGCCGTATCT GCGCCTTCTG CGGCGCCTCC AATCGAGAGC
GGGACGGTGC GCGCTCCGAT CCCCGGCGTC ATCCTTGCCG TTCGGGTCAA ACCCGGCGAT
CAGGTGACGG CAGGGCAGGA AGTGTGCGTG CTCGAAGCCA TGAAGATGCA GAACAGCATC
CGTGCAAAAC AGTCCGGCGT CGTTTCAGCC GTCTATGTGA GCGATGGGCA GCATGTGAAG
CACCACCAAC CGTTGATGGT CATTAAGTCG GAGTAA
 
Protein sequence
MKVRVLIEGT AYEVEIVDLH SRPVVAIVDG ERFEVWPESA SALPVGSLDG RQAQAPPASP 
APSLSPSAVS APSAAPPIES GTVRAPIPGV ILAVRVKPGD QVTAGQEVCV LEAMKMQNSI
RAKQSGVVSA VYVSDGQHVK HHQPLMVIKS E