Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0952 |
Symbol | |
ID | 5538418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1259337 |
End bp | 1259792 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640893101 |
Product | biotin/lipoyl attachment domain-containing protein |
Protein accession | YP_001431084 |
Protein GI | 156740955 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.157223 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGGTGC GCGTGCTTAT CGAGGGAACA GCATACGAGG TTGAGATTGT CGATCTCCAT TCGCGTCCGG TCGTTGCAAT CGTTGATGGT GAACGCTTCG AGGTCTGGCC CGAGTCCGCT TCCGCTCTGC CCGTCGGATC GCTCGATGGT CGGCAGGCGC AGGCGCCACC CGCATCCCCG GCGCCTTCTC TGTCGCCCTC CGCCGTATCT GCGCCTTCTG CGGCGCCTCC AATCGAGAGC GGGACGGTGC GCGCTCCGAT CCCCGGCGTC ATCCTTGCCG TTCGGGTCAA ACCCGGCGAT CAGGTGACGG CAGGGCAGGA AGTGTGCGTG CTCGAAGCCA TGAAGATGCA GAACAGCATC CGTGCAAAAC AGTCCGGCGT CGTTTCAGCC GTCTATGTGA GCGATGGGCA GCATGTGAAG CACCACCAAC CGTTGATGGT CATTAAGTCG GAGTAA
|
Protein sequence | MKVRVLIEGT AYEVEIVDLH SRPVVAIVDG ERFEVWPESA SALPVGSLDG RQAQAPPASP APSLSPSAVS APSAAPPIES GTVRAPIPGV ILAVRVKPGD QVTAGQEVCV LEAMKMQNSI RAKQSGVVSA VYVSDGQHVK HHQPLMVIKS E
|
| |