Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0942 |
Symbol | |
ID | 5538408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1248121 |
End bp | 1248492 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893091 |
Product | hypothetical protein |
Protein accession | YP_001431074 |
Protein GI | 156740945 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0665819 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.257026 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAGCAGGC GCGACGTTCC CCACCTTTCA TTTCTCCCTG CACTTGCCAC CTCCCCTCTC GCCACCCCCC TCCCCCCTCT TGCCTCGCGC CCCTTGCCTC TTGCCTCTCG CCTCGATTGC AACGACCAAC GCCGCAGGCA ACGCCAGTGT GACAGCGGTT GCCATCTGAG TGTCACCGAT CCGCTTGCGC TCGGCGACAC AGGTGAGGCG CAGTTCGTGT TGCAGGCGCA ACCCAACCCT GGCATTGCGA CGATGACCAT GTTGGTCGAA ATCGCGTCGG GTGCAGCCAA CCAAAACGCT CTCGCCGATG ACGGAGCAAT CGTAGAAGGT GCTATCTTAT ATCAACTGCT GTTGCCACCT GTCGCACGCT GA
|
Protein sequence | MSRRDVPHLS FLPALATSPL ATPLPPLASR PLPLASRLDC NDQRRRQRQC DSGCHLSVTD PLALGDTGEA QFVLQAQPNP GIATMTMLVE IASGAANQNA LADDGAIVEG AILYQLLLPP VAR
|
| |