Gene Rcas_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0942 
Symbol 
ID5538408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1248121 
End bp1248492 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content61% 
IMG OID640893091 
Producthypothetical protein 
Protein accessionYP_001431074 
Protein GI156740945 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0665819 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.257026 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCAGGC GCGACGTTCC CCACCTTTCA TTTCTCCCTG CACTTGCCAC CTCCCCTCTC 
GCCACCCCCC TCCCCCCTCT TGCCTCGCGC CCCTTGCCTC TTGCCTCTCG CCTCGATTGC
AACGACCAAC GCCGCAGGCA ACGCCAGTGT GACAGCGGTT GCCATCTGAG TGTCACCGAT
CCGCTTGCGC TCGGCGACAC AGGTGAGGCG CAGTTCGTGT TGCAGGCGCA ACCCAACCCT
GGCATTGCGA CGATGACCAT GTTGGTCGAA ATCGCGTCGG GTGCAGCCAA CCAAAACGCT
CTCGCCGATG ACGGAGCAAT CGTAGAAGGT GCTATCTTAT ATCAACTGCT GTTGCCACCT
GTCGCACGCT GA
 
Protein sequence
MSRRDVPHLS FLPALATSPL ATPLPPLASR PLPLASRLDC NDQRRRQRQC DSGCHLSVTD 
PLALGDTGEA QFVLQAQPNP GIATMTMLVE IASGAANQNA LADDGAIVEG AILYQLLLPP
VAR