Gene Rcas_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0941 
Symbol 
ID5538407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1247195 
End bp1248058 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content65% 
IMG OID640893090 
Productmethyltransferase type 11 
Protein accessionYP_001431073 
Protein GI156740944 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.238071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.425445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCGC ACACTGCTCG TAGTGCGTCA ATCCATGCCG TTCGGCGCTA CTACGAACAG 
AACACCCGCC TGTTTCGCGC GTTGGGGTTG GGGAATCGGG CGCATGCCGT GCATCGCGCC
GTCTGGGATG AAGCGACGGC GACGTTCGAT GCCGCGTTGC AGCGGGTCAA CGCGCTGGCG
CTGGCGGAGG TTCGGACGCT CCTCGCAGAA CAGAGCGTTT CAGTGTTGCG CCTGCTCGAT
CTGGGGTGCG GTCTGGGAGG TACGCTGGCA TACTGCGCGC GCGCGCTGCC GGAGGCGCGG
CTGGCTGGTG TGACCCTGAG TATGACGCAG GCGCAGATTG CACAACGGAC TCTGCCGCGC
GCGCGCGCAG TGGTGATCAC CGGAGATTTC CACCATCTTC CGTTCACTGC CAACTTCCAT
GTTGCGCTGG CAATCGAATC TCTTGCTCAT TCTCACGATC TCAATCGCGC CTTTGAGCAG
GCATCGGCAG CCTTGCTTCC AGGCGGACGC CTGATCGTCT GCGATGATGT CGTGGTGCGC
GCGCCGTCGA ACGCAGCCGA AGAACGCTGG CTGACAACGT TTCGCGCGGG ATGGTGTGTT
CCCGGCGTAC AACTGCTCGA TGAGACGATT GCTGCGGCGC GCCGCGCCGG GTTCGTTCTT
CGGAGCGCCC GCGATCTGAC CGGCGCCCTG CGGTTGCATC GCCTGCCGCC GTTCCTGGCA
GGCGCGGCGC GCGATCTGAT GCGCCTGGCG GGGCGGGCAT CTCTCTTCTT TCACAGCGTC
TCCGGCAGCC TGGCGCTCCA GGAGTGCCTG GCGCGCGGTA TCGTCGCATA TCACCTGATG
GTCTTCGAGA AGCGAAGACG ATAA
 
Protein sequence
MASHTARSAS IHAVRRYYEQ NTRLFRALGL GNRAHAVHRA VWDEATATFD AALQRVNALA 
LAEVRTLLAE QSVSVLRLLD LGCGLGGTLA YCARALPEAR LAGVTLSMTQ AQIAQRTLPR
ARAVVITGDF HHLPFTANFH VALAIESLAH SHDLNRAFEQ ASAALLPGGR LIVCDDVVVR
APSNAAEERW LTTFRAGWCV PGVQLLDETI AAARRAGFVL RSARDLTGAL RLHRLPPFLA
GAARDLMRLA GRASLFFHSV SGSLALQECL ARGIVAYHLM VFEKRRR