Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0941 |
Symbol | |
ID | 5538407 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1247195 |
End bp | 1248058 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640893090 |
Product | methyltransferase type 11 |
Protein accession | YP_001431073 |
Protein GI | 156740944 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.238071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.425445 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGTCGC ACACTGCTCG TAGTGCGTCA ATCCATGCCG TTCGGCGCTA CTACGAACAG AACACCCGCC TGTTTCGCGC GTTGGGGTTG GGGAATCGGG CGCATGCCGT GCATCGCGCC GTCTGGGATG AAGCGACGGC GACGTTCGAT GCCGCGTTGC AGCGGGTCAA CGCGCTGGCG CTGGCGGAGG TTCGGACGCT CCTCGCAGAA CAGAGCGTTT CAGTGTTGCG CCTGCTCGAT CTGGGGTGCG GTCTGGGAGG TACGCTGGCA TACTGCGCGC GCGCGCTGCC GGAGGCGCGG CTGGCTGGTG TGACCCTGAG TATGACGCAG GCGCAGATTG CACAACGGAC TCTGCCGCGC GCGCGCGCAG TGGTGATCAC CGGAGATTTC CACCATCTTC CGTTCACTGC CAACTTCCAT GTTGCGCTGG CAATCGAATC TCTTGCTCAT TCTCACGATC TCAATCGCGC CTTTGAGCAG GCATCGGCAG CCTTGCTTCC AGGCGGACGC CTGATCGTCT GCGATGATGT CGTGGTGCGC GCGCCGTCGA ACGCAGCCGA AGAACGCTGG CTGACAACGT TTCGCGCGGG ATGGTGTGTT CCCGGCGTAC AACTGCTCGA TGAGACGATT GCTGCGGCGC GCCGCGCCGG GTTCGTTCTT CGGAGCGCCC GCGATCTGAC CGGCGCCCTG CGGTTGCATC GCCTGCCGCC GTTCCTGGCA GGCGCGGCGC GCGATCTGAT GCGCCTGGCG GGGCGGGCAT CTCTCTTCTT TCACAGCGTC TCCGGCAGCC TGGCGCTCCA GGAGTGCCTG GCGCGCGGTA TCGTCGCATA TCACCTGATG GTCTTCGAGA AGCGAAGACG ATAA
|
Protein sequence | MASHTARSAS IHAVRRYYEQ NTRLFRALGL GNRAHAVHRA VWDEATATFD AALQRVNALA LAEVRTLLAE QSVSVLRLLD LGCGLGGTLA YCARALPEAR LAGVTLSMTQ AQIAQRTLPR ARAVVITGDF HHLPFTANFH VALAIESLAH SHDLNRAFEQ ASAALLPGGR LIVCDDVVVR APSNAAEERW LTTFRAGWCV PGVQLLDETI AAARRAGFVL RSARDLTGAL RLHRLPPFLA GAARDLMRLA GRASLFFHSV SGSLALQECL ARGIVAYHLM VFEKRRR
|
| |