| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0937 |
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| Symbol | |
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| ID | 5538403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1243854 |
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| End bp | 1245008 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893086 |
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| Product | peptidase C60 sortase A and B |
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| Protein accession | YP_001431069 |
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| Protein GI | 156740940 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3764] Sortase (surface protein transpeptidase) |
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| TIGRFAM ID | [TIGR01076] LPXTG-site transpeptidase (sortase) family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.1124 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATGGAA GTTGCGGTCG TTCCTGGTTC TCGAAGCAGC ATAGTATGAT CGCGCGTCTC
CTGATGATCA TCATCGTCTG CGCCGGGGCA TTGCTTCCGT CAAGCGCGCA TGCGCAGCGC
GGGGAGCGCT GCTTCACCGA AACAGGTTAC TGTATTGGCG GGCGCATTCG CGAGTTCTGG
GAGCAAAACG GCGGCTTGCG CGTGTTTGGT TACCCTATCA CGCCATTGCA AACAGAGACG
ATCGAAGGGC GAACATTGCA GGTGCAATGG TTCGAACGCG CGCGCCTGGA ATTGCATCCG
GCAAACCGGC GCCCCTACGA CGTGCAACTG GGTCGTCTCG GCGCCGAACT GCTCGCGCGC
AGTGATCGTG GCGGAACGCC GGTGAATGTC GCCGCGTCGG GTGAGTGTCG CCTGTTCCCT
CAGACCGGCG TCAGCGCCTG TGGTCCGATC CTGGCGGCAT GGCGCTCCGT CGGTTTGCAA
CTCGATGGGA AACCTGGCGT GAGCGAGGCG GAAAGTCTGG CGCTCTTCGG CGTTCCGTTG
ACCGACGCGC GCCTGGAGAC CCTTGCCGAT GGCAAAGCGT ATGTGGTGCA GTGGTTCGAG
CGAGGGCGTT TCGAGGTGCA TCCCGAAAAC ATGCCTCCAG CGAATGTCTT GCTCGGTCTG
CTGGGGCGCG AGTATGGACC GGTGGCGCGC GCGGGGCGAA CCGCAGGCGA CGTTCCGGCG
CGTATTGTCG CCGGCGATGT CGGCATGGAT GCCCGCATTG TCGCTGTTGG ACTGGATGCA
CAGGGAATGC CAATCGTGCC CGACCACGAC GTTGGCTGGT ACAACCGCAG CGCATTGCCG
GGGCAGGGCG AGAATGTGGT GCTATGGGGT CATGTGCTGC GTTTCAGCCA TGCACCGCGC
ATTCCTGCGC CATTTGCGCG TCTGAAAGAG TTGCGTCCCG GTGCGCGTCT GACAGTGTAT
GACTCAAACG GAACCGCCTT TGACTATGTG GTGACGCGCC AGGTGTGGGT GCGCCCGACC
GATGTGGAGT GGATGCTGCC GCAGGGTCGT GAGCGCCTGA CCCTTATCTC CTGCATCGGC
GATAAGGTGA TCGTCGGACG AGAAGTGGTG GATATGAGTC ACCGCCTGAT CACGATTGCC
GAACCGGTGC GCTGA
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| Protein sequence | MDGSCGRSWF SKQHSMIARL LMIIIVCAGA LLPSSAHAQR GERCFTETGY CIGGRIREFW
EQNGGLRVFG YPITPLQTET IEGRTLQVQW FERARLELHP ANRRPYDVQL GRLGAELLAR
SDRGGTPVNV AASGECRLFP QTGVSACGPI LAAWRSVGLQ LDGKPGVSEA ESLALFGVPL
TDARLETLAD GKAYVVQWFE RGRFEVHPEN MPPANVLLGL LGREYGPVAR AGRTAGDVPA
RIVAGDVGMD ARIVAVGLDA QGMPIVPDHD VGWYNRSALP GQGENVVLWG HVLRFSHAPR
IPAPFARLKE LRPGARLTVY DSNGTAFDYV VTRQVWVRPT DVEWMLPQGR ERLTLISCIG
DKVIVGREVV DMSHRLITIA EPVR
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