| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0931 |
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| Symbol | |
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| ID | 5538397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1235589 |
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| End bp | 1237406 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893080 |
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| Product | TrkA domain-containing protein |
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| Protein accession | YP_001431063 |
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| Protein GI | 156740934 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.18233 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.866463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAT CCTCGCAGGC AACGCGCGCC GGGCGATTGC GCCAGATCAG TCGTCTGGCG
CGCGCCAACC TGTACGATTT TCAATTACTC CTCCGCGAGT CGTGGTTGGT GCTGATCGCC
TTCGCAATTC TCGCAGGTAT CACCTCAACC TACCTTGCCT TTTTCTACCC CGAAAGGGGC
GGTTCCTCCC GTCCGCAAGG ACTGCCCGAA GCGCTCTATG AGACGCTTAC ATTGATGACA
CTCCAGAGCG ATCTGGATTT TCCGCGCGGC GATCTGATCG GTGAACTGAT CTTCTTCCTC
ACGCCGCTGC TTGGTCTGGC GCTGATCTTC CAGAGCGTTC TGAACTTTGG GCGCTTGTTG
CTCGACAAAG GGGGCCGCCG GGAAGCCTGG CAGGTGGCGC TGGCTTCAAC GTACCGTGAC
CATATCATCG TCTGTGGGTT GGGGCGTGTT GGGCTGCGTA TTGTGACCCA ATTGCACGCC
GCTGGTTACG AAACGGTTGT CGTTGAACGC GACTGGAACA GCGAATTTGT GCCGCGAGTC
CTCAGTCTTG GCGTCCCCGT CGTTCTGGGA GATGCGCGTG AGGCGACCAT TCTGCAGCAG
GCGGGAGTCA TGCGGGCGCG CGCGGTGATC GCTGCCATCA ACGATGACCT GCTGAATGTC
GAAATTGCGC TGGGAGCGCG CGGCGTGCGT TCTGATGTTC GTGTGGTGTT GCGGGTATTC
AATGAGGAAC TGGATCGCAA CCTCGAGCGG GCGCTCGGAC CCAACAGCGC TTTCAGCGCC
TCGGCGATCG CGGCGCCAAC CTGCGCCGCA GCCGCAGTCA GCCGTGAGAT CGACTATGCG
CTGACAGTTG GGAGGGCACA GTTAGGCGTC GCACAGATCG TCGTCCAGCG CGAGAGCAAT
CTATCCGGCT TTGTTCGCGC AATCGAAGAC GAGACATATG TGCGCATCCT GCACCACGTC
AGTCAGGAAG GGCGCGTCAT CCGCTACCAG TCGCTCAGCC AGTTGAGCGC CGGTGATCGG
ATCACCGTGA TCGGGACGCT CGAACGCATT GAAGCGATGC GCCAGCGCAA TACTCCGTTC
AGTAAACTCG CATTTCTTAC TGCCGAACGA CCGGTGCGAC CGACCGAACG GTACCACACG
GTCATCGTGT GCGGCCTGGG GAAGATCGGG TTTCGGGTGG TCAAACAGTT GCACGCCTTG
AACCCACGTC CACGAATCGT CGTGGTGCGC CTGGGAACCA ATGATCGTCC GGAGTTTGTC
CGGCAGATCA GGCAACTCGA AGACGTTGCC GACGTGATCG GCGACGCGCG TAACCTCGAG
GTGTTGTGTC GGGCTGGTCT TGATGAAGCC TATTCCATTG CCGCGCTTAC CTCCGATGAC
CTGCAAAATG TGCAGATCGC TCTGACTGCG CGCCGCCAAC GACCTGATGT GCACATTGTG
TTGCGCACCT TCAGCGACGC GCTGGCGGAA CGGTTGGCGG AGATGTTCGG CATTCACACA
ACGTACAGCA CGTCGGCGCT GGCGGCGCCG ACGATGGCAG CGGCGGCGCT GGCAGGCGAT
GTCAGCCAGG CATTGGTGGT CGGCGGACGG CTTTTCGCCG TCGATCAGAC ACATCTTTCC
GCAAAACACC CGTTTGTTGG CATGCGGATC GACGATCTGC GCGAGTACTC GACAGCGCTT
GTGCTCGAAT TACAGCGCGA CGGTCGCACC ATCCTGCTTC CTGATCTTGA CGTGCGTCTC
CAGGCTGGCG ACCAGGCGAC CCTGCTGGCG CCAATCGAGA CCATTCATCA CATACGTGGA
ATGGGGGTCA GGGGTTAG
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| Protein sequence | MNPSSQATRA GRLRQISRLA RANLYDFQLL LRESWLVLIA FAILAGITST YLAFFYPERG
GSSRPQGLPE ALYETLTLMT LQSDLDFPRG DLIGELIFFL TPLLGLALIF QSVLNFGRLL
LDKGGRREAW QVALASTYRD HIIVCGLGRV GLRIVTQLHA AGYETVVVER DWNSEFVPRV
LSLGVPVVLG DAREATILQQ AGVMRARAVI AAINDDLLNV EIALGARGVR SDVRVVLRVF
NEELDRNLER ALGPNSAFSA SAIAAPTCAA AAVSREIDYA LTVGRAQLGV AQIVVQRESN
LSGFVRAIED ETYVRILHHV SQEGRVIRYQ SLSQLSAGDR ITVIGTLERI EAMRQRNTPF
SKLAFLTAER PVRPTERYHT VIVCGLGKIG FRVVKQLHAL NPRPRIVVVR LGTNDRPEFV
RQIRQLEDVA DVIGDARNLE VLCRAGLDEA YSIAALTSDD LQNVQIALTA RRQRPDVHIV
LRTFSDALAE RLAEMFGIHT TYSTSALAAP TMAAAALAGD VSQALVVGGR LFAVDQTHLS
AKHPFVGMRI DDLREYSTAL VLELQRDGRT ILLPDLDVRL QAGDQATLLA PIETIHHIRG
MGVRG
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