Gene Rcas_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0926 
Symbol 
ID5538392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1220147 
End bp1221202 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content68% 
IMG OID640893075 
Productchromosome partitioning ATPase 
Protein accessionYP_001431058 
Protein GI156740929 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0003] Oxyanion-translocating ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.1243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0822651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGG CAGCGGAGGC GGCGCGCGCT GCCGATGCGG GAAAGCGCAC GTTGCTGCTG 
ACGTATGGCT CGACAGCGGG GTTGGGCGCG CTTTTGGGCG TTGCCATTGG CAGCGTGCCG
GTTGAAGTTG CACCGCGCCT CAATGCACTG GCGCTCGATG CCCGCAGCGA ACTGGCAGCC
GCCTGGGAGG AAACCCGCGC GACCCTCCTG CCGCCCTTCA GCAACCTCGC CGGTGATGAA
CTCCCCCAAC CCCCGGCGTC TGACGCTGCG TTTGCGCTTC TCCGTATCCG TGATCTCGCT
CCCAACTATG ATCGCGTGGT TGTGGACGCC GGACCGCACG ATCCACTGAT CGAAGCGCTT
GGCGTTCCCG ACAATCTGCG CTGGATCGCG CGACTTCTCA TTGGTCTCGA CGGTCAACCC
GCACAGGGGT CGCTGCTGCC GGGGTTGTTG CTGCCGCCTG AGTTTGTCAG CAATCTGCGG
CGCGTGCTGG TGGAAGCCGA GCGCCTGCGC AACCTGCTCG ACGCCCCCGC GAGTATGGTC
TGTTATGTGC TGCGCCCCGA TGCGGCGGCG CTGGCAGAGG CGCGCCTGGC AATCCCCGCC
ATTCAGTTGC ACGGCGTGGC TGTCGGTGCG CTGGTCGCCG GTCCACTCCT GCCGCCCAAC
CCGGAAGACG CGCGCCTGGC GCCGCTCGAA CGGTTGCAGG CAGCACTGCT CGATGAAGCC
GCTGCGATCT GGTCCGCCCG GCCGTTGCTC CGGCTTGATA TGAGCGCGAC CGCCGGCGGG
CATATGCCGT TGCTGCTCGC CGGGCGCGCC ATGGGTGACG CGGGCGCCGT AACGGTGCGT
TCACCCATCG GCAATGACTA TCGCGGCGAA CCGGCGTTGA CCTTTGAACT TCCCGGTCTG
CCACAGGGCG CTATCGGGTT GACGCTGAGC GGCGACGATC TGATCGTGCG CGTGGGGTCC
TATCGGCGGC ATGTGCCGCT GCCTTCGCGC CTGCGCGGTG TTCGCGCCGT GCGCGCCACT
CGTGAAGGCG ATCTGCTCGT GGTGCGGCGC AGGTGA
 
Protein sequence
MAAAAEAARA ADAGKRTLLL TYGSTAGLGA LLGVAIGSVP VEVAPRLNAL ALDARSELAA 
AWEETRATLL PPFSNLAGDE LPQPPASDAA FALLRIRDLA PNYDRVVVDA GPHDPLIEAL
GVPDNLRWIA RLLIGLDGQP AQGSLLPGLL LPPEFVSNLR RVLVEAERLR NLLDAPASMV
CYVLRPDAAA LAEARLAIPA IQLHGVAVGA LVAGPLLPPN PEDARLAPLE RLQAALLDEA
AAIWSARPLL RLDMSATAGG HMPLLLAGRA MGDAGAVTVR SPIGNDYRGE PALTFELPGL
PQGAIGLTLS GDDLIVRVGS YRRHVPLPSR LRGVRAVRAT REGDLLVVRR R