Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0926 |
Symbol | |
ID | 5538392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 1220147 |
End bp | 1221202 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640893075 |
Product | chromosome partitioning ATPase |
Protein accession | YP_001431058 |
Protein GI | 156740929 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0003] Oxyanion-translocating ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.1243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0822651 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCGG CAGCGGAGGC GGCGCGCGCT GCCGATGCGG GAAAGCGCAC GTTGCTGCTG ACGTATGGCT CGACAGCGGG GTTGGGCGCG CTTTTGGGCG TTGCCATTGG CAGCGTGCCG GTTGAAGTTG CACCGCGCCT CAATGCACTG GCGCTCGATG CCCGCAGCGA ACTGGCAGCC GCCTGGGAGG AAACCCGCGC GACCCTCCTG CCGCCCTTCA GCAACCTCGC CGGTGATGAA CTCCCCCAAC CCCCGGCGTC TGACGCTGCG TTTGCGCTTC TCCGTATCCG TGATCTCGCT CCCAACTATG ATCGCGTGGT TGTGGACGCC GGACCGCACG ATCCACTGAT CGAAGCGCTT GGCGTTCCCG ACAATCTGCG CTGGATCGCG CGACTTCTCA TTGGTCTCGA CGGTCAACCC GCACAGGGGT CGCTGCTGCC GGGGTTGTTG CTGCCGCCTG AGTTTGTCAG CAATCTGCGG CGCGTGCTGG TGGAAGCCGA GCGCCTGCGC AACCTGCTCG ACGCCCCCGC GAGTATGGTC TGTTATGTGC TGCGCCCCGA TGCGGCGGCG CTGGCAGAGG CGCGCCTGGC AATCCCCGCC ATTCAGTTGC ACGGCGTGGC TGTCGGTGCG CTGGTCGCCG GTCCACTCCT GCCGCCCAAC CCGGAAGACG CGCGCCTGGC GCCGCTCGAA CGGTTGCAGG CAGCACTGCT CGATGAAGCC GCTGCGATCT GGTCCGCCCG GCCGTTGCTC CGGCTTGATA TGAGCGCGAC CGCCGGCGGG CATATGCCGT TGCTGCTCGC CGGGCGCGCC ATGGGTGACG CGGGCGCCGT AACGGTGCGT TCACCCATCG GCAATGACTA TCGCGGCGAA CCGGCGTTGA CCTTTGAACT TCCCGGTCTG CCACAGGGCG CTATCGGGTT GACGCTGAGC GGCGACGATC TGATCGTGCG CGTGGGGTCC TATCGGCGGC ATGTGCCGCT GCCTTCGCGC CTGCGCGGTG TTCGCGCCGT GCGCGCCACT CGTGAAGGCG ATCTGCTCGT GGTGCGGCGC AGGTGA
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Protein sequence | MAAAAEAARA ADAGKRTLLL TYGSTAGLGA LLGVAIGSVP VEVAPRLNAL ALDARSELAA AWEETRATLL PPFSNLAGDE LPQPPASDAA FALLRIRDLA PNYDRVVVDA GPHDPLIEAL GVPDNLRWIA RLLIGLDGQP AQGSLLPGLL LPPEFVSNLR RVLVEAERLR NLLDAPASMV CYVLRPDAAA LAEARLAIPA IQLHGVAVGA LVAGPLLPPN PEDARLAPLE RLQAALLDEA AAIWSARPLL RLDMSATAGG HMPLLLAGRA MGDAGAVTVR SPIGNDYRGE PALTFELPGL PQGAIGLTLS GDDLIVRVGS YRRHVPLPSR LRGVRAVRAT REGDLLVVRR R
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