| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0925 |
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| Symbol | |
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| ID | 5538391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1216974 |
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| End bp | 1218428 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893074 |
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| Product | fumarate lyase |
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| Protein accession | YP_001431057 |
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| Protein GI | 156740928 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1027] Aspartate ammonia-lyase |
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| TIGRFAM ID | [TIGR00839] aspartate ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.751355 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0958221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG GATTCCGCAT CGAGAAGGAC TCACTCGGCG AAGTGCAGGT GCCGGCGAAC
GCGCTCTATG GCGCACAGAC GCAACGTGCT GTGATGAACT TCCCGGTGAG CGGCATGCGT
CCGTATCCGG CGTTCGTTTG GGCGCAGGCG ATGATCAAGC GCGCCGCCGC AGAAGTCAAC
CGCGATCTCG GACTGTTCAA CGATGTCACG GTCGGCGACC GCGCGATCAG CGGCCGTCAG
ATTGCCGACG CCATTATTCA GGCGGCTGAC GAAGTGCTCG ATGGGCAGCA CGCCGATCAG
TTCGTCGTCG ATCCGTTCCA GGCAGGGGCC GGTACCAGTC ATAACATGAA CCTCAATGAG
GTGATTGCCA ACCGCGCCAA CCAAATTCTC GGCTTTGCAA TCGATGATCC GAAGAAACCG
GTCAGTCCGA ACGACCACGT CAATATGGCG CAGAGCACCA ACGACACCAT CCCAACGGCT
ATCCGCCTCG GATGCCTCTG GCGCATCGAC GAACTGCTGG CGGCCATCGA CCGGCTCGCC
GATGCGCTCG AAGCCAAAGC GGAAGAGTTC GATCCAATCG TCAAATCGGG ACGTACTCAC
CTTCAGGACG CGGTGCCGGT ACGTCTGGGG CAAGAGTTTG GCGCATATGC GCTGGCAGTG
CGCAATGATC GCGAGCGCAT TGCGGTTGCC GCCGACCGGC TGCGCCGCCT GGGCATTGGC
GGTACGGCTG TCGGCAGCGG ATTGAATGCG CATCCTGAAT ACCATTTGCG CATGGTGAAG
CGCCTGTCGG AACTGACCGG TCAGGAACTG CGCTCGGCGG GCAACCTGTT CGAGGCGATG
CAGAGCATGG CTGACCCGGC GGATTTCTCG GCGTCGCTGC GCACGTTGAG CATCACGCTG
ACTCGCATTG CGAACGACCT CCGTCTGCTG GCGTCCGGTC CCACCACCGG TCTCGATGAA
ATTCGCCTGC CTGCGGTGCA GCCCGGTTCG AGCATCATGC CGGGCAAGGT CAATCCGGTG
CTGGCGGAAA TGCTGAATAT GGCGTGTTTC CATGTGCAGG GATGCGACCT GACCGTGTCG
CTTGCGGCGC AAGCCGGGCA ACTGGAACTC AATGTGATGA TGCCGATTAT TGCGCACAAT
CTGTTCGAGA TGATGCACGT CCTCATTGGC GCAATCAATG CCTTCACCGA GAAGTGCGTC
GTCGGCATCA CCGCCAATCC GGCGAAGGCG ACCGGTTGGC TGGCGAAGAA CCCGATCCTG
GTGACGGCGC TGAACCCGGT GATCGGGTAT CTCAACGGTG CAGCCGTCGC CAAGGAAGCG
CTGGCGACGG GTAAGACGAT CAAGGAAGTG GTGGTCGAAA AAGGGTTGAT GAGTGCTGAA
CAGGTTGATG AACTCCTTGA CGTGCGCGCA ATGACCGAAG GCGGCATCAT GGGATTTGGC
GGCGGTGGCG GGTAG
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| Protein sequence | MTEGFRIEKD SLGEVQVPAN ALYGAQTQRA VMNFPVSGMR PYPAFVWAQA MIKRAAAEVN
RDLGLFNDVT VGDRAISGRQ IADAIIQAAD EVLDGQHADQ FVVDPFQAGA GTSHNMNLNE
VIANRANQIL GFAIDDPKKP VSPNDHVNMA QSTNDTIPTA IRLGCLWRID ELLAAIDRLA
DALEAKAEEF DPIVKSGRTH LQDAVPVRLG QEFGAYALAV RNDRERIAVA ADRLRRLGIG
GTAVGSGLNA HPEYHLRMVK RLSELTGQEL RSAGNLFEAM QSMADPADFS ASLRTLSITL
TRIANDLRLL ASGPTTGLDE IRLPAVQPGS SIMPGKVNPV LAEMLNMACF HVQGCDLTVS
LAAQAGQLEL NVMMPIIAHN LFEMMHVLIG AINAFTEKCV VGITANPAKA TGWLAKNPIL
VTALNPVIGY LNGAAVAKEA LATGKTIKEV VVEKGLMSAE QVDELLDVRA MTEGGIMGFG
GGGG
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