Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0923 |
Symbol | |
ID | 5538389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1214353 |
End bp | 1215777 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640893072 |
Product | hypothetical protein |
Protein accession | YP_001431055 |
Protein GI | 156740926 |
COG category | [R] General function prediction only |
COG ID | [COG5621] Predicted secreted hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.946452 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTCTG AATTTGACGA GCAGGCTGAT GCTTCGATGA TGATCAATGC CGGTGTGCGC CGGCAAGAGT GGCGCTCCTA TCCGTACCTT CTCGTTCCCG ACGATCCACA ACTGCGCTTC CCACAGGCGG AAGGATACCA GGACATGGCG AGCGACACCT ACTACGCTTC GGGGATTGTG CAGGGTGAAC AGACCGGAAA ACGGTACGCT TTCTTCGTCA TTTTTGCGCG TCTCTCCGGC TTTTCGAGCG CTTCCGGCAT CGATATGCAC CTCGGCGCGC TGTTCGATCT TGCGAACGGC GGATATACCA CATTCGCGTC GTATGACCTG CCTCCAAAAC GCTGGTTTCG TCAACGTCTG ACGATTACAC GCGGTCATCT TGGCGTCGCC TGGAACTCAC CGTGCTGGAA GAGCCGCTTC TGGGCGCGGT ACGATGCTTC CGGCGATCTC GTGCCATTCG GGTATACGCT CGATGTATGC GGGCGCGACA GTCGTGGCGA TCCACTGGCG CTCGATCTCG TTGTCGATGC GGTCAAACCG CCACAACCGG TCGGTGGTCC GGTTCACAAC GGCGCCATCA CTGTGATGGG GCAACCGAAT ACCCGCTCCT ACTTCCAGAG CCTGAGCTAT CGCGGGTCGC TCCGGTGGCG TGGTGTGGAA GAAGCGGTGT GGGGCGACAT CGGTTGGCTC GACCGGCAGT GGTTCCCGGA GTATGTTGGC GCGTACTCCG GCATACTGGC GGATCGCTAC AGCCACCAGT GGGCGCAGAT GTCGTTCGAC AACGGGTGGG AACTGAGCCT GTGGCGGAAC TTTGCACGTC ACGAGCGCAA CCGTGAAATT CCGTTCAGCG GACTGACGAT CACCGATCCT GAAGGGCGCA CGTCGTTCAC CGATGCGTAC CGGATCGAAG CACTCAGTTA CTGCCGTGAC GAAGGGTATG TCACGCCGCT CTACGCGCCT GTTCAGCGTC TCTTTGGCGT GCGAGGCGAC AGGCGCTACT TTCTCGACGC CTACCGGTTC CATGTGCCGT CGCTCGATCT GATTGTGACC AGCACGCCGC TGGCGCCTGC CCCGGCGCAC CGCATGCCGG TCGATTATCT CACCGGACCG ACCCGCCTGG AAGGAACAAT GGCAGGGAGA CCGGTGACCG GCTACGGGTT CAACGAGCGC ACGCTGGGGT TGTGGCGACC GTGGGAGTTG TGCCAGGCGC TCGCCGACTC GCTGCGCCCT CTGGTTGACG AAGGAAAGGC GCCGTCCACA CTGGTGCAGG CAATAGACGA CGCGCGCCTC GCCATTGACA CAAAGCGCAC CAACGAAGCA AGACGCATTC TCGACCGGCA GGTGCGTCCC GCGCTCGACA CCCTTCCCGA ATCGCAGTGT CAACGCCTGA TTCGCCTGGG CAACGATCTG GCGGCAATGC TGTAG
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Protein sequence | MTSEFDEQAD ASMMINAGVR RQEWRSYPYL LVPDDPQLRF PQAEGYQDMA SDTYYASGIV QGEQTGKRYA FFVIFARLSG FSSASGIDMH LGALFDLANG GYTTFASYDL PPKRWFRQRL TITRGHLGVA WNSPCWKSRF WARYDASGDL VPFGYTLDVC GRDSRGDPLA LDLVVDAVKP PQPVGGPVHN GAITVMGQPN TRSYFQSLSY RGSLRWRGVE EAVWGDIGWL DRQWFPEYVG AYSGILADRY SHQWAQMSFD NGWELSLWRN FARHERNREI PFSGLTITDP EGRTSFTDAY RIEALSYCRD EGYVTPLYAP VQRLFGVRGD RRYFLDAYRF HVPSLDLIVT STPLAPAPAH RMPVDYLTGP TRLEGTMAGR PVTGYGFNER TLGLWRPWEL CQALADSLRP LVDEGKAPST LVQAIDDARL AIDTKRTNEA RRILDRQVRP ALDTLPESQC QRLIRLGNDL AAML
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