| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0921 |
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| Symbol | |
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| ID | 5538387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1209719 |
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| End bp | 1212046 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893071 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_001431054 |
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| Protein GI | 156740925 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3408] Glycogen debranching enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC AGCAGTCGCC TGTCTGGATC AGGCTGCCAC AGTGCGCCGA GACACCGGTC
GTTGCAGCGT ATCGATTGCA CGTTCACATC GAGCAGGATA GTGTTGCGCG AGTGCGGGTA
AGCGCTGATG AGCGATACGA GTTATGGCTC GATGGTCATC GGATAGGACG CGGACCTGAA
CGTGGCGTGC CTGACATGTG GTTCTATGAC ATGTATGATC TGTCGCTGAG GGCAGGGAGA
CACGTGCTGA CGGCGCGCGT CTGGCGTCTG AAAGAATTGG CGCCACTGGC GCAGATGAGC
GTCGCGCCGG GATTCGTGCT CTGGGCTGAT GCGCCCTTCC GCCATTTGCT TTCGACCGGC
ATCGCCCAAT GGGAAGTCAA GTTACTGACC GGCTACTCGT TCTTTTTGCC GGGCGCCACA
TCATACTCGC CCTGGTTCTC CGGCGCCAAT CAGGTCATCG ATGGAGCATC ATTCGATTGG
GAGGCGCTGA ACGGCGACGG TGACGGATGG GAACCGGCTG CGCATCGCAT GGAGGGCAGG
GCATTGCTCT TTGGCATTCA ACCGGAACAT GCGTTGACAC CCGGACCGCT GCCGGCTCAG
TGCTCCATAC CACGCACTGC TGGCATTGTT CGATGGGTCA GCGCAGGAGC CTGGGAGAAC
CCGGAGATTG TGGCAGTGCT GCCCGACAAT CGCATGGACG AGGAGCGCGA CCACTGGCAG
GCGCTGGCGG CGGGACAAGC GCCGTTCATC CTGCCACCCC ATGAACGACG GCAGGTGATA
TTTGATCTCA CCGACTATGT GTGCGCATAT CCGCAGATTG TCGTATCTGG CGGAAGCGGC
AGTGTGCTGA CGATTGGTTG GGCGGAAGCA TTGTTCTGGG ACCTCAAAGG ACAACGCAAA
GAGCGCCGCG ATCAGATCGA AGACCGCTAT TTCGTCAGTC TGATGCGCGA TGTGTTTCGT
TCGGACGGCG GAGCAGAACG GGTGTTCACA ACCCTCTGGT GGCGTGCCGG GCGCTATCTG
CACCTGTTGG TCGAAACCGC CGACGAGCCA CTGACCATTG AGTCATTCAC TCTAACGGAG
ACGCGCTATC CGCTGGAGAT GGAAAGTCGC CTGACACTGG ACGATGAACG TCTGAGTCGC
GCGCTGCCGC TTATGGTTCG CGCATTGCAG ATGTGCTCTC ACGAGACATA TCTGGACTGT
CCCTACTACG AGCAGATGAT GTACGTGGGA GACGCGCGCC TGGAGGCGCT GACAACCTAT
GCAATCAGCC GCGATGACCG ACTGGCGCGC AAGGCGCTCA TGCTGTTCGA TCATTCGCGT
CAGGCGAGTG GCATGGTCCT GGCGCGGTTT CCGTGCTGCG ACCGTCAGAT CATTCCACCA
TTTGCGCTCT GGTGGGTGGC AATGATCCAC GATTATGCCA TGTGGCGCGG CGACCAGGCA
TTTATCGCCG GTCTGCTTCC CGGCATGCGC GCCGTGCTGG ATGGGTTCCT GCGCCTGATC
GATAGCGACG GACTGTTGCC ATCGCCATCG GGGTGGAACT TCGTTGACTG GGTTCCCGCG
TGGCGCCACG GCGTTCCGCC CGATGGCGAC AGAGGGGTCA GCGGTGTGCT CAACTGGCAT
CTGGCATACA CGCTGCGGCT GGCGGCAGAA CTCGAACAGT GGGCAGGCGA AGCGGAGCTG
GCGCAACGCT ATGAGCGCCA TCGAACGCGA CTGGCAGCGC GCCTGATAGC GTGTTTCTGG
AATGACGCGC GGGGATTGTT CGCCGATGAC CTGGAGCATA CCTCGTTCTC AGAGCACACA
CAGGCGCTGG CGGTATTGAG CGGTGCGCTC GACCCGCAAC AACAGCAGCG CATTGCCGAA
CGGCTGCGCA ACGATAGACA TTTGACCCGG ACGACGATCT TCTTCACGCA CTATCTGTTT
GAAGCATACT ACATTCTGGG GATGGCAGAC GCCTTCTTTG AACGGCTTGA TGTGTGGCTC
TCGCTCCCCG ACGAAGGGTT TAAGACCACG CCAGAGCAAC CGGAACCAAC CCGTTCCGAC
TGTCACGGAT GGGGAGCGCA TCCGCTTTAC CACTGTTTTG CAACTATTCT GGGCATCCGT
CCGGCATCGT TCGGATTTGA TCACGTGGTC ATTGCTCCGA TGCCAGGCCA TCTGAGCGCC
GTCTCCGGCG CACTGGCGCA TCCACGCGGA ATGATTGATG TGACGATCAC GCAAATAAAC
GGACGAATGA CCATCGATAT CAATCTGCCG GAGGGATTAA CCGGGACATT CCGGTACGGA
CATGTAGTGC AGGAATTGAC CGCAGGGGCG CACCGTTGGT GCGCCTGA
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| Protein sequence | MSTQQSPVWI RLPQCAETPV VAAYRLHVHI EQDSVARVRV SADERYELWL DGHRIGRGPE
RGVPDMWFYD MYDLSLRAGR HVLTARVWRL KELAPLAQMS VAPGFVLWAD APFRHLLSTG
IAQWEVKLLT GYSFFLPGAT SYSPWFSGAN QVIDGASFDW EALNGDGDGW EPAAHRMEGR
ALLFGIQPEH ALTPGPLPAQ CSIPRTAGIV RWVSAGAWEN PEIVAVLPDN RMDEERDHWQ
ALAAGQAPFI LPPHERRQVI FDLTDYVCAY PQIVVSGGSG SVLTIGWAEA LFWDLKGQRK
ERRDQIEDRY FVSLMRDVFR SDGGAERVFT TLWWRAGRYL HLLVETADEP LTIESFTLTE
TRYPLEMESR LTLDDERLSR ALPLMVRALQ MCSHETYLDC PYYEQMMYVG DARLEALTTY
AISRDDRLAR KALMLFDHSR QASGMVLARF PCCDRQIIPP FALWWVAMIH DYAMWRGDQA
FIAGLLPGMR AVLDGFLRLI DSDGLLPSPS GWNFVDWVPA WRHGVPPDGD RGVSGVLNWH
LAYTLRLAAE LEQWAGEAEL AQRYERHRTR LAARLIACFW NDARGLFADD LEHTSFSEHT
QALAVLSGAL DPQQQQRIAE RLRNDRHLTR TTIFFTHYLF EAYYILGMAD AFFERLDVWL
SLPDEGFKTT PEQPEPTRSD CHGWGAHPLY HCFATILGIR PASFGFDHVV IAPMPGHLSA
VSGALAHPRG MIDVTITQIN GRMTIDINLP EGLTGTFRYG HVVQELTAGA HRWCA
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