| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0919 |
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| Symbol | |
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| ID | 5538385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1203566 |
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| End bp | 1206310 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640893069 |
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| Product | glycoside hydrolase family 3 protein |
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| Protein accession | YP_001431052 |
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| Protein GI | 156740923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGACA CGGGAGTCGC TCTCACCAAC GACGTGGAGG CGCGCATCGA AGCGCTGCTG
CGACAGATGA CGCTGGCGGA GAAGGTCGCG CTGATGGCAG GATCGAGCAT GTGGACGACC
ACTCCCATCG AGCGGTTGGG GATTCCTGCG ATCAAAGTCA CGGACGGACC GAACGGCGCG
CGGGGTGCAG GTGGATTCGT CGGTGGCGCC GTTACGGCAG CGTGCTTCCC TGTAGGAATT
GCGCTGGCCG CGACATGGAA CAGCAGGCTG GTGGAAGAGG TTGGCGAGGC GCTCGCCGAA
GAAGCGCAAT CCAAAGGCGC TCGCCTCCTG CTGGCGCCGA CCGTTAACAT CCATCGTTCG
CCGCTCAATG GGCGCAACTT CGAGTGCTAT TCCGAAGACC CGTATCTCTC GGCGCGCATG
GCGGTCGCCT ATATCACCGG GTTGCAGCGG CGCGGCGTTG GCGCGACGAT CAAACACTAC
GTCTGCAACG ACTCGGAGTT CGAGCGGAAC ACGATCAGTT CTGAGGTCGA TGAACGCACA
TTGCGCGAGA TCTATCTGCC TCCCTTTCGC GCTGCCGTGC AGGAGGCGAA AACCTGGGCG
GTCATGGCGG CGTACAATCG TGTCAATGGG GTGTATGCCA GCGAGCATCC GGTATTGCTC
AACGATATCC TGAAGCGCGA ATGGGGATTC GATGGCATTG TGATGTCCGA CTGGTTCGGC
ACGAAGAGCG TCGTCGAGGC TGCCGCCAAC GGGCTGGACC TTGAAATGCC GGGACCAACG
CGCTGGCGCG GTGAGCGATT AGTCGCCGCC GTCGAGAATG GTCAGGTGCG TATGGAAGCC
ATCGATGAGT CGGCTTGTCG AATATTGCGC ACGATTGCGC GCGCGGGGGC GTTCGAGACA
CCGGAGATTC CCCCTGAGCA GGCGATTGAT CGCCCTGAGC ACCGGGCGCT GATCCGCCGT
GCTGCCGCCG AGAGCATGGT GCTGCTCAAG AACGATGGCG GCATCCTGCC GCTCAATCTG
GCGAACCTGT CGTCGATTGC GATCATCGGA CCCAACGCGA AGACGGCACA GATCATGGGT
GGCGGGAGCG CACAGGTCAA CGCGCACTAC GCCATTTCGC CCTACGACGG CATTGCGGCG
CGAGTCGGCG GGCAGGTGAT CCTGGAGTAC GAGATCGGTT GCACGAACCA TCGACACCTT
CCGCGCTTCG ATAGCCGATT GGTGACGCCG GAGAGCGGCG AGGGGCGCGG CTTTACCGTC
GCTTACTACA ACACCCACGA CCTGTCCGGT GAGCCGGTTC ATCAGGCGGC GACCGAGAGC
AGCGAGCAGG TCTGGCTAGG GGAGGTGGCG CCGGGCGTCG ATCCACGCCA GTTTTCGGCG
CGTTTCACCG CGCGGTTTAC GCCCGCCGAA CGTGGAACGC ATACCTTTAG CCTGATCAGC
GCCGGGCTGA GTCGCCTCTT TGTCGACGAC GTACTGATCA TCGACAACTG GACGACCCAG
ACACGCGGGG ATGCGTTCTT TGGCGCAGGA AGCGCCGAAG CGACGGCGCC GATGACGCTG
GAAGCCGGTC GAACCTACGC GCTTCGCCTG GAATATAGTA ATCAGGGCGC GACCATGCTT
GCCGCTGTGC GGCTCGGCTA TCTGCCGCCG GTTGCAGAAG ACGCCATCGA GCGCGCCGCA
GCCCTGGCGG CGCAATCCGA CGTTGCGCTG GTGTTTGTCG GGCTGAATGC CGATTGGGAG
AGCGAAGGGT ATGATCGCCC GCATATGGAC CTGGTCGGCA GGCAGGACGA ACTGGTCGAG
CGCGTGGCAG CCGCCAATCC GCGCACGATT GTCGTGCTGC AAACCGGTTC GCCGGTGACG
ATGCCGTGGC TGGATCGGGT GGCGGCGGTC CTTCAGGCGT GGTATCCCGG TCAGGAATGC
GGTAACGCGA TTGCCGACGT GTTGTTTGGC GATGTTAACC CCTCGGGCAG ACTGCCGCAG
ACTTTTCCGG TTCGATTGGA AGACAATCCG GCATACATCA ACTATCCCGG TGAGAACGGG
CGGGTGCGCT ACGGTGAAGG TATCTTCGTC GGCTACCGCT ACTACGAGAA GAAAAAGGTT
GCGCCGCTGT TTCCCTTTGG CTTCGGTCTT TCGTATACCA CGTTCCGCTA CGATAACCTG
CGCCTGAGCG CCGATGTCAT TGCTCCCGAT GATCGGCTCA CGGCGCAGAT CGACATCACC
AACACCGGGA TGGTCGCCGG TCAGGAAGTG GTGCAACTGT ACGTGCGCGA CAGCGCCGCG
CGCGTCGCCC GACCGGCAAA GGAGTTGAAA GGGTTTGTCA AAGTCGCGCT GCAACCGGGC
GAGACACAAA CGGTGACCTT CTCGCTTGAT CGGGAGGCGC TGGCGTACTG GGACGACGTC
CAGCATGCCT GGGTCGCCGA GGCAGGTGAG TTCGAGGTTC TTGTGGGAAG TTCATCGCAG
GACATCCGGG CGCGCGCGGT GTTTCATCTG AATGATACTG TCGCCTTCGG CGGACCGACA
AAGTCGCCGG TGCAACTGAG TGTCGACTCG CCGGTCAAGG CGTTGATCGA ACACGACGGT
GCGCGTGCAG TGCTGGAACG CCACATGCCC GGTTTTGTCG AACAGGCTGG CGTCGGTGTC
ATGATGGGGC TGACGCTGGC GCAGATGGCA GCATTCGCAG CGGATCGGAT CACGCCGGAA
CTGTTGGGCG CGATTGCCGC AGACCTGGCG CGGATTCAGG CATGA
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| Protein sequence | MTDTGVALTN DVEARIEALL RQMTLAEKVA LMAGSSMWTT TPIERLGIPA IKVTDGPNGA
RGAGGFVGGA VTAACFPVGI ALAATWNSRL VEEVGEALAE EAQSKGARLL LAPTVNIHRS
PLNGRNFECY SEDPYLSARM AVAYITGLQR RGVGATIKHY VCNDSEFERN TISSEVDERT
LREIYLPPFR AAVQEAKTWA VMAAYNRVNG VYASEHPVLL NDILKREWGF DGIVMSDWFG
TKSVVEAAAN GLDLEMPGPT RWRGERLVAA VENGQVRMEA IDESACRILR TIARAGAFET
PEIPPEQAID RPEHRALIRR AAAESMVLLK NDGGILPLNL ANLSSIAIIG PNAKTAQIMG
GGSAQVNAHY AISPYDGIAA RVGGQVILEY EIGCTNHRHL PRFDSRLVTP ESGEGRGFTV
AYYNTHDLSG EPVHQAATES SEQVWLGEVA PGVDPRQFSA RFTARFTPAE RGTHTFSLIS
AGLSRLFVDD VLIIDNWTTQ TRGDAFFGAG SAEATAPMTL EAGRTYALRL EYSNQGATML
AAVRLGYLPP VAEDAIERAA ALAAQSDVAL VFVGLNADWE SEGYDRPHMD LVGRQDELVE
RVAAANPRTI VVLQTGSPVT MPWLDRVAAV LQAWYPGQEC GNAIADVLFG DVNPSGRLPQ
TFPVRLEDNP AYINYPGENG RVRYGEGIFV GYRYYEKKKV APLFPFGFGL SYTTFRYDNL
RLSADVIAPD DRLTAQIDIT NTGMVAGQEV VQLYVRDSAA RVARPAKELK GFVKVALQPG
ETQTVTFSLD REALAYWDDV QHAWVAEAGE FEVLVGSSSQ DIRARAVFHL NDTVAFGGPT
KSPVQLSVDS PVKALIEHDG ARAVLERHMP GFVEQAGVGV MMGLTLAQMA AFAADRITPE
LLGAIAADLA RIQA
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