| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0912 |
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| Symbol | |
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| ID | 5538378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1196350 |
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| End bp | 1197393 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640893062 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001431045 |
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| Protein GI | 156740916 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.322098 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTTC CCATTCACTT CTACAAGCCG CTGGCGGCTG GCGCGCCACA ACCGATCCGC
GAACTGCCGG TGCGCCCTGA GCGGGTGATC CACTTCTTCC CGCCGCACGT CGAAAAGATT
CGCGCGCGCA TTCCCGAAGT GGCGAAGCAG GTGGATGTGC TGTGCGGCAA CCTGGAAGAT
GCCATTCCGA TCGATGCCAA AGAAGCGGCG CGCGCCGGGT TCATCGAGGT CGCCCGCAAT
ACCGATTTCG GCGACACCGC GCTCTGGGTG CGGGTCAATG CCCTCAACAG CCCCTGGGTG
CTCGATGACA TCGCCGACAT CGTCGCCACC GTCGGCAACA AACTCGACGT CATGATGATC
CCCAAGGTCG AAGGACCGTG GGATATCCAC TTTGTGGATC AGTACCTGGC GCTGCTGGAG
GCGAAGCATC AGATTCAGAA GCCGATCCTG ATCCATGCGC TGCTGGAGAC GGCGCAGGGC
ATGATGAATC TGGAGGCGAT CGCCGGCGCC AGCCCGCGCA TGCATGGCTT CAGCCTGGGA
CCGGCGGACC TGGCGGCGTC GCGTGGAATG AAGACCACGC GCGTTGGCGG CGGGCATCCG
TTCTATGGCG TGCTTGCCGA CCCGCAGGAA GGGCAGGAGC ATCGCCCCTT CTACCAGCAG
GACCTGTGGC ACTACACGAT TGCGCGCATG GTCGATGTCG CCGTTGCGCA CGGGCTGCGC
GCTTTCTACG GACCGTTTGG CGACATCAAG GACGAAGCCG CCTGCGAGGC GCAGTTCCGC
AACGCCTTCC TCCTTGGTTG CACCGGCGCC TGGTCGCTTG CGCCGAACCA GATTCCGATC
GCCAAGCGCG TCTTCAGTCC CGATGTCAAT GAAGTCCTGT TCGCCAAACG CATCCTCGAC
GCCATGCCCG ACGGTTCCGG CGTGGCCATG ATCGACGGCA AGATGCAGGA CGACGCGACC
TGGAAGCAGG CGAAGGTGAT CGTCGATCTG GCGCGGATGA TCGCCAAAAA GGACCCCGAA
CTGGCGCAGG CGTATGGGTT CTAA
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| Protein sequence | MKLPIHFYKP LAAGAPQPIR ELPVRPERVI HFFPPHVEKI RARIPEVAKQ VDVLCGNLED
AIPIDAKEAA RAGFIEVARN TDFGDTALWV RVNALNSPWV LDDIADIVAT VGNKLDVMMI
PKVEGPWDIH FVDQYLALLE AKHQIQKPIL IHALLETAQG MMNLEAIAGA SPRMHGFSLG
PADLAASRGM KTTRVGGGHP FYGVLADPQE GQEHRPFYQQ DLWHYTIARM VDVAVAHGLR
AFYGPFGDIK DEAACEAQFR NAFLLGCTGA WSLAPNQIPI AKRVFSPDVN EVLFAKRILD
AMPDGSGVAM IDGKMQDDAT WKQAKVIVDL ARMIAKKDPE LAQAYGF
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