| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0909 |
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| Symbol | |
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| ID | 5538375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 1192148 |
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| End bp | 1193587 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640893059 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001431042 |
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| Protein GI | 156740913 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.756109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAAAG GGGCGCGTTC GGCAAAAGCG GTAAGTCAGA TGGTTGCAAC GGAGGGCGCT
GGCGCTCCGT CGTCGACATC CGAAGAAGCG CCGGAACATG TGGCGCCCGA GGCGGTCGGT
GAAGGCGCCC CCCCGCCAGA TGAAGCAGTT GCAGCATCGT CTGAGCAATC GACATCGCCG
GCGGTCCGCA GCGGCGTATA CGCAATTCCC ATGCCGTCGC CGGATCGACC GCCTGTGCAT
GATCGCCTGC CGCTCAGTGG CATTCGGGTG ATTGATGTCG GCAACTTTCT CGCCGGTCCT
TACGCTGCTT CGATCCTGGG GGAGTTCGGC GCTGAGGTGC TGAAAGTCGA GCATCCGATT
GGCGGCGACC CAATGCGGCG GTTCGGCACC CCCACAGCGC GCCACGACGC AACACTCGCC
TGGCTCAGCG AAGCGCGCAA TCGCAAATCG GTGACCATCG ACCTGCGGCA GAAGGAAGGG
GTTGATCTGT TCCTCAAACT GGTGGCAAAG TCGGACATCC TGATCGAAAA CTTTCGCCCC
GGCACCATGG AGGAGTGGGG GCTGGGATGG CCCGTGCTGC GCGCTGCCAA TCCGGGATTG
GTGATGCTGC GCGTGTCGGG ATATGGGCAG ACCGGTCCAT ACCGCCGGCG GTCCGGTTTT
GCGCACATTG CGCATGCGTT TGGCGGCCTC TCGTACCTGG CGGGGTTTCC CGGCGAAACG
CCGGTGCTGC CGGGCACTGC GCCGCTCGGT GACTACATCG CAAGCCTGTT CGGCGCTATC
GGCATCCTCA TTGCCTTGTG GCACAAGGAG AAGACGGGGC AGGGACAGGT GATCGATGTG
GCGATCTACG AAGCGGTGTT TCGGGTGCTC GACGAAATCG CGCCCGCCTA TGGTCTGTTT
GGCAAAATTC GCGAGCGTGA AGGATCGGGA AGCTTCATCG CTGTGCCCCA CGGTCACTTC
CGCACCAAAG ACGATAAGTG GGTCGCTATC GCCTGCACTA CCGACAAAAT GTTTGAGCGT
CTGGCAGAGG CGATGGAGCG ACCGGAACTG GCCTCCCCTG AACTGTACGG CGATCAGCGG
AAACGACTGG CTGCGCGTGA TACGGTCAAC CAGATTACCA TCGATTGGGT CGGCTCGCTG
ACGCGCGACG AAGTGATGCG ACGCTGCCTG GAAAAGGAGG TTCCGATCGG TCCGCTGAAC
AGTATTGCCG ATATTTTCAA CGACGAGCAT TTTCAGGCGC GCGGCAATCT GGCATGTGTC
GAAGCGGAGG GTATTGGCGG AGTGGTGGTG CCGAATGTCG TGCCGACCCT CTCTGAAACG
CCCGGACGCA TCACGAATCT GGGTCCGCCG CTCGGCAATC ACACGTATGA GGTCTTGCGC
GAATTGCTCA ACATTTCGGC GGAGGAGATT AAGCATCTGC GGAGTCGAAA GATTATTTAG
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| Protein sequence | MTKGARSAKA VSQMVATEGA GAPSSTSEEA PEHVAPEAVG EGAPPPDEAV AASSEQSTSP
AVRSGVYAIP MPSPDRPPVH DRLPLSGIRV IDVGNFLAGP YAASILGEFG AEVLKVEHPI
GGDPMRRFGT PTARHDATLA WLSEARNRKS VTIDLRQKEG VDLFLKLVAK SDILIENFRP
GTMEEWGLGW PVLRAANPGL VMLRVSGYGQ TGPYRRRSGF AHIAHAFGGL SYLAGFPGET
PVLPGTAPLG DYIASLFGAI GILIALWHKE KTGQGQVIDV AIYEAVFRVL DEIAPAYGLF
GKIREREGSG SFIAVPHGHF RTKDDKWVAI ACTTDKMFER LAEAMERPEL ASPELYGDQR
KRLAARDTVN QITIDWVGSL TRDEVMRRCL EKEVPIGPLN SIADIFNDEH FQARGNLACV
EAEGIGGVVV PNVVPTLSET PGRITNLGPP LGNHTYEVLR ELLNISAEEI KHLRSRKII
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