| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0906 |
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| Symbol | |
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| ID | 5538372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1185887 |
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| End bp | 1187866 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640893056 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001431039 |
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| Protein GI | 156740910 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGACGGA CACGACTGCT TCTGACGGGG CTGCTGCTCG TGGTCAGCCT GATCATCGCC
GCCTGTGGGG GAGGACCGGC GGCGCCAGCA GCAACACCAG CCGGTTCAGC GACGACGCCA
GCCGCGCCGG CGCCGGCGGG CGGAACAGAC GCGACACTGA CGGAGTTTGG CGATCTGCCG
CGCCACGAGA CGTTGATCGT CGATATTCTC ACCGGGCGGG TCGGCTCGCC GGACGACTTC
AACAACTGGG TGGGCTGGAA GTGGCGTGAT CGCGGGATGC AGAACCTGGC GAACGAGCCG
CTCTGGTCGG TTGATTTCGC CACCGGCAAG ATTATTCCGG GTCTGGCAGA GGGCGATCCG
GTTTACAACG CAGATTTTAC CGCCCTCACG ATTCCGCTGC GCAAGGGGGT GACGTGGCAC
GACGGACAGC CGTTCACAGC GGCAGACGTG GTCTTCACCG TCGAAACGCT GATGAAACAC
GAGGGGTTCG GCGACAACAG TTTTTTCGTG GAGAATGTGA AATCGGTCTC CGCCGTTGAT
GATCATACCG TCGCCTTCGA GTTGAACGCG CCGAACTCGC GCTTCCACAC CCGCTTCCTG
GATCGCTGGG GCTGCACCTG GATTATGCCC AAGCATATCT GGGAGTCGGT GGAAGACCCG
GTCACGTTTA AGTTTAACCC CTTCATCGGC ACCGGTCCGT ACAAACTGCA CAGTTTCGAC
CCATCCGGGT TCTGGACGAT TTGGGAGAAA CGGGCTGACT GGGACAAGAG TCCGACCGGC
ATGATGTACG GTGAACCAAA GCCCAAATAT GTCATCTTCC GGTACTTCGC CAACGAAGGC
GCTAAGATTC TGGCGCAGTT AACCCATCAG GTCGATGTTG TCAACGTGTC GTCCGACGGG
CTTAAGGCCG TGCTGACCCA GTGCGACTCC TGCCGCGCCT ATCAGTTGAA CTGGCCCTAC
GTCGTCAACA ATGATCCGGC GCAGACCGGC ATCACGTTCA ACACCGCCAG GGCGCCGTAT
GACAACCGCG ATGTGCGATG GGCGCTGCTG CTGGCAATTG ATATTGCCGA ATACATGGGC
ATTGCCGTCG ATGGCACCGG CGCGCTCAGC CCGGTTCACA TTCCGTCGCT GTCGAACTAT
CCCAAAGACT TCATCCAACC GATGCTGCCC TGGCTGGAAG AGTTCACCCT CGATCTCGGC
AATGGCGAAA CCTTCAAGCC CTTCGACCGA AACGCCTCGC AGCGCATCGC CGAGTATGCT
CGCTCGCGCG GCTACGCTGT GCCCGACGAT CCCGCCGAGC AGGCAAAACT GTTTGGCTAT
GGCTGGTACA AGTATGCGCC CGATGTCGCC GAAAAGCTGC TGGTCAAGAA CGGCTTCACC
AAGACGTCCG ACGGCAAATG GCTCTTGCCG GACGGCACGC CCTGGAAGAT TCGCTGCCTG
ACCGGCACGC AACTGGCGAC CGGCATGGGT GAACGCAACT GCGTCGCCGC TGTGCAGCAG
TGGAAGAGAT TCGGCATCGA CGCCGAGGTG TATTCCTCGG AAGCGGCAGC AAGCCTGAAT
GCAACCGGCG ATTTCGACGT TTCCAGCAAC TGGCCCGCGC AGGAACCCTG GGGCGCCGGA
CCAGACCTCT ACCGTGTGCT CGACTACTAC AACTCGGCGT ATGTGAAACC GGTCGGCGAG
AATACCAGCG GTCACCCGTC GCGCTGGTCG AGTCCGGAGA TGGATGCGAC GATCGAGAAA
TTGCGCCAGA CCGATCCCAC CAATTATCAG GCGGTCGTTG ATGTCGGCAT CGAAGGCTTG
AAGATTGCCG TGCGTGAAAT GCCCGGCATT CCGACCTATG GCTATGTCGG GTTCATTGCA
TGGGATCAGA CCTACTGGAC CAACTGGCCC GGCGCTGAGA ATCCCTACAC GCAACCGTAT
ACGCACTGGG GTCCGTTCAA ATATATGACG CCGTTCCTTC AGCCAACCGG GACGCGGTAA
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| Protein sequence | MRRTRLLLTG LLLVVSLIIA ACGGGPAAPA ATPAGSATTP AAPAPAGGTD ATLTEFGDLP
RHETLIVDIL TGRVGSPDDF NNWVGWKWRD RGMQNLANEP LWSVDFATGK IIPGLAEGDP
VYNADFTALT IPLRKGVTWH DGQPFTAADV VFTVETLMKH EGFGDNSFFV ENVKSVSAVD
DHTVAFELNA PNSRFHTRFL DRWGCTWIMP KHIWESVEDP VTFKFNPFIG TGPYKLHSFD
PSGFWTIWEK RADWDKSPTG MMYGEPKPKY VIFRYFANEG AKILAQLTHQ VDVVNVSSDG
LKAVLTQCDS CRAYQLNWPY VVNNDPAQTG ITFNTARAPY DNRDVRWALL LAIDIAEYMG
IAVDGTGALS PVHIPSLSNY PKDFIQPMLP WLEEFTLDLG NGETFKPFDR NASQRIAEYA
RSRGYAVPDD PAEQAKLFGY GWYKYAPDVA EKLLVKNGFT KTSDGKWLLP DGTPWKIRCL
TGTQLATGMG ERNCVAAVQQ WKRFGIDAEV YSSEAAASLN ATGDFDVSSN WPAQEPWGAG
PDLYRVLDYY NSAYVKPVGE NTSGHPSRWS SPEMDATIEK LRQTDPTNYQ AVVDVGIEGL
KIAVREMPGI PTYGYVGFIA WDQTYWTNWP GAENPYTQPY THWGPFKYMT PFLQPTGTR
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