| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0905 |
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| Symbol | |
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| ID | 5538371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 1184742 |
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| End bp | 1185746 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640893055 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001431038 |
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| Protein GI | 156740909 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCTGA AACAGTATCT GATCCCGCGC CTGATACAGT ATGTGCTGGT CATTTTCCTG
GGGATCACGG CGGTCTTTTT CATCCCGCGC CTGCTGCCGA ATGATCCGGT GCTGCGCACG
ATCGCCGAGA TGCGCGCACG CGGCTCGTAC CTCGAACCAG GAGCAATGGA TAAGATCATC
GCCGACTTGC AGCAGATGTA TGGGCTGGAA GGAACGCTGT TCGACCAGTA TCTGGCGTTC
TGGGGTCGGC TTTTCCGCGG CGATCTCGGA GTTTCGTTCT TTCAGTTTCC AACGCCGGTG
CTCGACCTGA TCATGACAGC CTTGCCATGG ACCACAGGGT TGTTGCTCAC AACCACCCTC
TTGTCGTGGG CGCTTGGCAA TCTGATCGGC GGATTCGCCG GCTATTACGC GAACCGGCGC
TGGTCGCGCG CGCTCGATAC GGTTGCGATG GTGGTGCGTC CCTTGCCCTA CTACATCTTC
GCTTTTGCGC TGCTGCTGCT CTTTGCCTAT CTCCTGCGCT GGTTCCCGGT TTCAGGCGGC
GCCAGGCTGG GGATGCGGCC ATCCTGGACA TGGACCTTCG TCCAGAGCGT ACTCTGGCAT
TCGGTGCTGC CGGCGCTCTC GATCTTCATT CTGAGCGCCG CCGTCTGGTT TCAGACGATG
AAACTGGTGG TGCAGAACAT CAACGCGGAA AGTTTCGTCG CTTACGCCAA ACTTAGCGGC
GTTCGAGAGC ACCGGATCGT CTCGCGCTAT GTCATCCGTA ACGCCCTGTT GCCGCAGATC
ACGGGGCTGG GGCTATCACT GGGGTTGATC TTCAGCGGGG CGTTGATTAC CGAGATCGTG
TATTCGTATC CCGGATTGGG CACCCTGCTT TACAATGCCA TCGTCAACGG CGATTACAAT
CTGATCATGG GTATCACCAT CTTCTCGATT GTCGCTATCA CGACCAGTGT TCTCATTGTC
GATCTGATCT ACCCGTTCTT CGACCCGCGG ATCCGGTATA GGTAG
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| Protein sequence | MFLKQYLIPR LIQYVLVIFL GITAVFFIPR LLPNDPVLRT IAEMRARGSY LEPGAMDKII
ADLQQMYGLE GTLFDQYLAF WGRLFRGDLG VSFFQFPTPV LDLIMTALPW TTGLLLTTTL
LSWALGNLIG GFAGYYANRR WSRALDTVAM VVRPLPYYIF AFALLLLFAY LLRWFPVSGG
ARLGMRPSWT WTFVQSVLWH SVLPALSIFI LSAAVWFQTM KLVVQNINAE SFVAYAKLSG
VREHRIVSRY VIRNALLPQI TGLGLSLGLI FSGALITEIV YSYPGLGTLL YNAIVNGDYN
LIMGITIFSI VAITTSVLIV DLIYPFFDPR IRYR
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