Gene Rcas_0899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0899 
Symbol 
ID5538365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1176925 
End bp1178487 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content60% 
IMG OID640893049 
Producthypothetical protein 
Protein accessionYP_001431032 
Protein GI156740903 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGG AAATGCGCGT CTTTGTCGAC TCGCTGCGCA AGAACATGAC TGCCGAGGAC 
GTGGTCAATC TTGAAGCGTG TATGGACTGT AAGATGTGCG GTGAAGCCTG CGCGTGGTAT
CTGGTCACCG GCGACGAAAA ACTGCATCCC ACCCACAAAA CCGGGCTGAT ACGCCAGGTC
TATCAGCGCT ACATGACGCT CGAAGGGCAG ATCGGCGGAG CACTCGGATT GGTTCCCACG
CCAACGGTGG ACGACCTGAA GGAGAACATG CGCTACTTCT GGGCATGCAC CGCGTGCGGA
CGCTGCACGC TCGCCTGCCC GGCAGGCATC AGCACACGCC GTATTGTGCG CCTCGCGCGC
GCCGCTTACG CCGACTCCGG GTTGAGCTAC GCCAACCCGA CCATCAAATC CATCGTCGAA
AACACCGAGC GTTACCGCCA CAGTTTCGGA TTGACCATCC CGCAGGTCAT CGGACGGGTT
GGTTTGTTCC TGCGCAGCGA AGGGATCGAA GTGCCGGTCG ATGTGCACGG CGCCGAAATG
CTCTTCGTCT GTCCGGCGGC TGGCAACACC AAAATCCCTG ATTACGGCAT CAAACTGATC
AAAATCCTCA ATGCTGCCGG GGTCAGTTAC ACCATCTCGC CGTATGTGAT CGACACCGGC
ACCGAGATCG ACCACATCGC GGTTCACCAC AATCTCTCAA AGCAAATGCT GGAAGAGTGG
GAACAGGAAG CGGATCGGCT CGGCGTCAAG AAGATACTGC TGGTCGAATG CGGCTGCGAC
GCGCGCACGC TCTACGCCGA GGCGTCGGAA ACCCTGGGAC GTCCCTTCCG CTATCCGATT
GTGAGCGTCG ATACGCTGAT GCTCGACCTG ATCCGGGAAG GGCGGTTGCC GGTCGAAAAG
ACCGACCTGA AAGTCACGCT GCACGATCCG TGCTACGCCA CGCGCCTCTC CGGGTTGGGA
GACGTGTTCC GCGATCTGCT GTACCTCGTG ACCGACAATT TTGTTGAAAT GACCCCTAAT
CGTGAGCACA ACTACTGCTG CAACGGCGGC GCCGGCGGCA TGCGTTTGCC GGAAAACACC
GACCTGCGAC GCAAGATTTC GGTGCTGAAA GCAAACCAGA TCCGCGCAAC CGGCGCCGAG
TATGTCACCT CGCCATGCGT TGTCTGCACC CTGTCGCTGG AAGACACCTG CCGTACCTAC
GGACTGGCGC AACCTGGAGA ACGGATGGCG CTGGTGTTGT TCGAAGTCGT CTATGAAGCC
ATGGAACCGG CGCTGGCAAA GCGCGGCGAA CTGGATCGCA TGTTCGTTCC GGCGGAATTG
AAGAACCGTG ATCCTGGCTT CTTCCTGGAA CACAGTATCG AAGGGCGGAT GGCCGCGCTC
ATGCAGACGC CGGAGTTCCC GGCGCTGCTC GACTGGCTGG AGCGTGATGA GATTGTCCAA
CGTTTCGCCA AAGACCATCC GCAGGTGTAC GACCATCTGC ACGCGTTGCG CGACATGACG
ATGTTGACTA TGCCAGCGTT GCACACGCGA GCCGTGGCGG ATCAGTCGCA GGTGCAGTCG
TGA
 
Protein sequence
MEAEMRVFVD SLRKNMTAED VVNLEACMDC KMCGEACAWY LVTGDEKLHP THKTGLIRQV 
YQRYMTLEGQ IGGALGLVPT PTVDDLKENM RYFWACTACG RCTLACPAGI STRRIVRLAR
AAYADSGLSY ANPTIKSIVE NTERYRHSFG LTIPQVIGRV GLFLRSEGIE VPVDVHGAEM
LFVCPAAGNT KIPDYGIKLI KILNAAGVSY TISPYVIDTG TEIDHIAVHH NLSKQMLEEW
EQEADRLGVK KILLVECGCD ARTLYAEASE TLGRPFRYPI VSVDTLMLDL IREGRLPVEK
TDLKVTLHDP CYATRLSGLG DVFRDLLYLV TDNFVEMTPN REHNYCCNGG AGGMRLPENT
DLRRKISVLK ANQIRATGAE YVTSPCVVCT LSLEDTCRTY GLAQPGERMA LVLFEVVYEA
MEPALAKRGE LDRMFVPAEL KNRDPGFFLE HSIEGRMAAL MQTPEFPALL DWLERDEIVQ
RFAKDHPQVY DHLHALRDMT MLTMPALHTR AVADQSQVQS