Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0899 |
Symbol | |
ID | 5538365 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 1176925 |
End bp | 1178487 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640893049 |
Product | hypothetical protein |
Protein accession | YP_001431032 |
Protein GI | 156740903 |
COG category | [C] Energy production and conversion |
COG ID | [COG0247] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGCGG AAATGCGCGT CTTTGTCGAC TCGCTGCGCA AGAACATGAC TGCCGAGGAC GTGGTCAATC TTGAAGCGTG TATGGACTGT AAGATGTGCG GTGAAGCCTG CGCGTGGTAT CTGGTCACCG GCGACGAAAA ACTGCATCCC ACCCACAAAA CCGGGCTGAT ACGCCAGGTC TATCAGCGCT ACATGACGCT CGAAGGGCAG ATCGGCGGAG CACTCGGATT GGTTCCCACG CCAACGGTGG ACGACCTGAA GGAGAACATG CGCTACTTCT GGGCATGCAC CGCGTGCGGA CGCTGCACGC TCGCCTGCCC GGCAGGCATC AGCACACGCC GTATTGTGCG CCTCGCGCGC GCCGCTTACG CCGACTCCGG GTTGAGCTAC GCCAACCCGA CCATCAAATC CATCGTCGAA AACACCGAGC GTTACCGCCA CAGTTTCGGA TTGACCATCC CGCAGGTCAT CGGACGGGTT GGTTTGTTCC TGCGCAGCGA AGGGATCGAA GTGCCGGTCG ATGTGCACGG CGCCGAAATG CTCTTCGTCT GTCCGGCGGC TGGCAACACC AAAATCCCTG ATTACGGCAT CAAACTGATC AAAATCCTCA ATGCTGCCGG GGTCAGTTAC ACCATCTCGC CGTATGTGAT CGACACCGGC ACCGAGATCG ACCACATCGC GGTTCACCAC AATCTCTCAA AGCAAATGCT GGAAGAGTGG GAACAGGAAG CGGATCGGCT CGGCGTCAAG AAGATACTGC TGGTCGAATG CGGCTGCGAC GCGCGCACGC TCTACGCCGA GGCGTCGGAA ACCCTGGGAC GTCCCTTCCG CTATCCGATT GTGAGCGTCG ATACGCTGAT GCTCGACCTG ATCCGGGAAG GGCGGTTGCC GGTCGAAAAG ACCGACCTGA AAGTCACGCT GCACGATCCG TGCTACGCCA CGCGCCTCTC CGGGTTGGGA GACGTGTTCC GCGATCTGCT GTACCTCGTG ACCGACAATT TTGTTGAAAT GACCCCTAAT CGTGAGCACA ACTACTGCTG CAACGGCGGC GCCGGCGGCA TGCGTTTGCC GGAAAACACC GACCTGCGAC GCAAGATTTC GGTGCTGAAA GCAAACCAGA TCCGCGCAAC CGGCGCCGAG TATGTCACCT CGCCATGCGT TGTCTGCACC CTGTCGCTGG AAGACACCTG CCGTACCTAC GGACTGGCGC AACCTGGAGA ACGGATGGCG CTGGTGTTGT TCGAAGTCGT CTATGAAGCC ATGGAACCGG CGCTGGCAAA GCGCGGCGAA CTGGATCGCA TGTTCGTTCC GGCGGAATTG AAGAACCGTG ATCCTGGCTT CTTCCTGGAA CACAGTATCG AAGGGCGGAT GGCCGCGCTC ATGCAGACGC CGGAGTTCCC GGCGCTGCTC GACTGGCTGG AGCGTGATGA GATTGTCCAA CGTTTCGCCA AAGACCATCC GCAGGTGTAC GACCATCTGC ACGCGTTGCG CGACATGACG ATGTTGACTA TGCCAGCGTT GCACACGCGA GCCGTGGCGG ATCAGTCGCA GGTGCAGTCG TGA
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Protein sequence | MEAEMRVFVD SLRKNMTAED VVNLEACMDC KMCGEACAWY LVTGDEKLHP THKTGLIRQV YQRYMTLEGQ IGGALGLVPT PTVDDLKENM RYFWACTACG RCTLACPAGI STRRIVRLAR AAYADSGLSY ANPTIKSIVE NTERYRHSFG LTIPQVIGRV GLFLRSEGIE VPVDVHGAEM LFVCPAAGNT KIPDYGIKLI KILNAAGVSY TISPYVIDTG TEIDHIAVHH NLSKQMLEEW EQEADRLGVK KILLVECGCD ARTLYAEASE TLGRPFRYPI VSVDTLMLDL IREGRLPVEK TDLKVTLHDP CYATRLSGLG DVFRDLLYLV TDNFVEMTPN REHNYCCNGG AGGMRLPENT DLRRKISVLK ANQIRATGAE YVTSPCVVCT LSLEDTCRTY GLAQPGERMA LVLFEVVYEA MEPALAKRGE LDRMFVPAEL KNRDPGFFLE HSIEGRMAAL MQTPEFPALL DWLERDEIVQ RFAKDHPQVY DHLHALRDMT MLTMPALHTR AVADQSQVQS
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