Gene Rcas_0891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0891 
Symbol 
ID5538357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1165846 
End bp1166661 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content60% 
IMG OID640893042 
Productalpha/beta hydrolase fold 
Protein accessionYP_001431025 
Protein GI156740896 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.020907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGA CGCGCACAAT CGTCACCGTC GCCGGAAGTG CGCCTGTGCG CCTGAGCGTG 
ATCGATGCTG CGCCTGTCGA AGCGGCACAA GGCACAATGG TGTTTATCCA TGGCGCCGGT
GGGTGTGCAG AACAATGGTT GCCGCAGTTG ACCCGCTTTG TTCGCAATTA CCGCGTCATT
GCGTTCGACC TTCGCGGACA CGGTCAATCC GAGGCGCCCC GCTCCGCCTA CACGCTGGAA
GAGTTCTTGT GGGATTTCAC CCAACTGCTC GACCGTTTGC AGGTGCGTGA ACCGTTCATT
CTGGCAGCGC ACTCGTTTGG CGGACCCATC GCGCTGACAT TTACCGCCGC GCAACCACAG
CGCGTCGCGC GGTTGGCACT GTTGGCGACG GCGCCGGAGA TTCATTTGCA CCCGGTGCTC
GAAATGGCGC TGAAACTGCC GATCCCGCTT ACCGCCCTCG AACGATTGCG CCCTGTGCTC
GCGCCCAAAC TGCACGCGCC ATTGTTCGTG ATCAAGCGCG TGCTGGCAGG AACACTCTTT
CCCTGGCGCG GCTGGGACTT GCTGCCGCAG ATAACCACGC CGACGCTCAT TATCGGCGGG
CAGTTCGACT TCATTGTACC GCCATCAGTA TTGCAACGTA TGCACCGCAT GATGCCCGGA
TCGCGCCTGG AAATTATCCG GTATGCCCGT CATTTGCCGC AACTCGAACG TCCGCAAGCA
GTCAATCGCG CCATCGAGCA TTTTATTGGC ATCCGGCGCA GTTGGCGCGG TGAGGTTGAA
GATGACGATA TTCTCAGGGA GGAGGGGCTT TTGTGA
 
Protein sequence
MELTRTIVTV AGSAPVRLSV IDAAPVEAAQ GTMVFIHGAG GCAEQWLPQL TRFVRNYRVI 
AFDLRGHGQS EAPRSAYTLE EFLWDFTQLL DRLQVREPFI LAAHSFGGPI ALTFTAAQPQ
RVARLALLAT APEIHLHPVL EMALKLPIPL TALERLRPVL APKLHAPLFV IKRVLAGTLF
PWRGWDLLPQ ITTPTLIIGG QFDFIVPPSV LQRMHRMMPG SRLEIIRYAR HLPQLERPQA
VNRAIEHFIG IRRSWRGEVE DDDILREEGL L