Gene Rcas_0874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0874 
Symbol 
ID5538340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp1143339 
End bp1143767 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content59% 
IMG OID640893025 
Producthypothetical protein 
Protein accessionYP_001431008 
Protein GI156740879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00504983 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000040546 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCTGCCG GGCGTGCCGG GATCATGGTT GGGCGGATGA TGGGTCAACG CCGCTCGCGC 
GATTCGAATG CCGATGCCGT ATCGTCACCA TTTGGGCGAC CGGCGTATAG GCTCTTCCGC
ACTGAGAGGC GGGGAGGAAC TCCATCCGAC CGGAAGAGGC TGGCGTCGAT CACATCGATG
GCATTGCAGA CGTTTGAAAA CATATGTGTA TCGCGCGGGA AGGGAGAACG ACCGTCGTTT
GAGCGGTTGC GTGGTATGAT GTCGCAGCAA GGGTGCAGAG GTCATCGCGT TGAGCGTCGT
GGCGCCATGA CCTGCGAACG AACAATCCGG TCGCTGGATC GCGCGAGGGG GACGCAGCGA
ACAGTGCAAA CACATGTTCT TGACACGATA CCGGTCTATG CTATACTGGC ACAGATAACG
CCTCGCTAG
 
Protein sequence
MPAGRAGIMV GRMMGQRRSR DSNADAVSSP FGRPAYRLFR TERRGGTPSD RKRLASITSM 
ALQTFENICV SRGKGERPSF ERLRGMMSQQ GCRGHRVERR GAMTCERTIR SLDRARGTQR
TVQTHVLDTI PVYAILAQIT PR